Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq8 581 1e-163 >seq8 Length=1276107 Score = 581 bits (644), Expect = 1e-163 Identities = 434/504 (86%), Gaps = 12/504 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || ||||||||||||| ||| ||| | ||| ||| |||||||||||||||||| Sbjct 879968 GTTCTCATTCCAATTATCAGAGTTGAAAAACCCCGATATTGTTATTTATTGTCACTACCT 879909 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 879908 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 879849 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| | |||| |||| Sbjct 879848 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTGAACACCACGGTA 879789 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||| |||||||||||||||||||||||||||||| | || ||||||| Sbjct 879788 GGCCTCTATCCTACCGTCGAAAGTTGATAGGGCAGAAATTTGAATGGAACACCGCCGGCG 879729 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 | |||||||||| | ||| ||||||| |||| |||| | | ||| | || || Sbjct 879728 CGAGGCCATGCGGTCCGTGAAGTTATCATGATTCAC-------CGCAGAACGAGGTCGG- 879677 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 | |||||||||||||||| ||||||||||||| ||| ||| ||||||||||||||||| Sbjct 879676 TCTTTATCTAATAAATACGTCCCTTCCGAAGTC-GGGATTTACGCATGTATTAGCTCTAG 879618 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||| ||||||||||||||||||| || | |||| |||| || |||||||||||| Sbjct 879617 AATTACTACGGTTATCCATGTAGTAA-ACACCACCAAAGAAACTATTGCTGATTTAATGA 879559 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct 879558 GCCATTCGCAGTTTCACAGTAT--AACGCTTATACTTAGACATGCATGGCTTAATCTTTG 879501 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 879500 AGACAAGCATATGACTACTGGCAG 879477 Score = 581 bits (644), Expect = 1e-163 Identities = 434/504 (86%), Gaps = 12/504 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || ||||||||||||| ||| ||| | ||| ||| |||||||||||||||||| Sbjct 895150 GTTCTCATTCCAATTATCAGAGTTGAAAAACCCCGATATTGTTATTTATTGTCACTACCT 895091 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 895090 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 895031 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| | |||| |||| Sbjct 895030 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTGAACACCACGGTA 894971 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||| |||||||||||||||||||||||||||||| | || ||||||| Sbjct 894970 GGCCTCTATCCTACCGTCGAAAGTTGATAGGGCAGAAATTTGAATGGAACACCGCCGGCG 894911 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 | |||||||||| | ||| ||||||| |||| |||| | | ||| | || || Sbjct 894910 CGAGGCCATGCGGTCCGTGAAGTTATCATGATTCAC-------CGCAGAACGAGGTCGG- 894859 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 | |||||||||||||||| ||||||||||||| ||| ||| ||||||||||||||||| Sbjct 894858 TCTTTATCTAATAAATACGTCCCTTCCGAAGTC-GGGATTTACGCATGTATTAGCTCTAG 894800 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||| ||||||||||||||||||| || | |||| |||| || |||||||||||| Sbjct 894799 AATTACTACGGTTATCCATGTAGTAA-ACACCACCAAAGAAACTATTGCTGATTTAATGA 894741 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct 894740 GCCATTCGCAGTTTCACAGTAT--AACGCTTATACTTAGACATGCATGGCTTAATCTTTG 894683 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 894682 AGACAAGCATATGACTACTGGCAG 894659 Score = 581 bits (644), Expect = 1e-163 Identities = 434/504 (86%), Gaps = 12/504 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || ||||||||||||| ||| ||| | ||| ||| |||||||||||||||||| Sbjct 921819 GTTCTCATTCCAATTATCAGAGTTGAAAAACCCCGATATTGTTATTTATTGTCACTACCT 921760 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 921759 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 921700 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| | |||| |||| Sbjct 921699 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTGAACACCACGGTA 921640 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||| |||||||||||||||||||||||||||||| | || ||||||| Sbjct 921639 GGCCTCTATCCTACCGTCGAAAGTTGATAGGGCAGAAATTTGAATGGAACACCGCCGGCG 921580 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 | |||||||||| | ||| ||||||| |||| |||| | | ||| | || || Sbjct 921579 CGAGGCCATGCGGTCCGTGAAGTTATCATGATTCAC-------CGCAGAACGAGGTCGG- 921528 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 | |||||||||||||||| ||||||||||||| ||| ||| ||||||||||||||||| Sbjct 921527 TCTTTATCTAATAAATACGTCCCTTCCGAAGTC-GGGATTTACGCATGTATTAGCTCTAG 921469 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||| ||||||||||||||||||| || | |||| |||| || |||||||||||| Sbjct 921468 AATTACTACGGTTATCCATGTAGTAA-ACACCACCAAAGAAACTATTGCTGATTTAATGA 921410 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct 921409 GCCATTCGCAGTTTCACAGTAT--AACGCTTATACTTAGACATGCATGGCTTAATCTTTG 921352 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 921351 AGACAAGCATATGACTACTGGCAG 921328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399713024