Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1 241 1e-58
seq7 187 2e-42
>seq1
Length=2053059
Score = 241 bits (266), Expect = 1e-58
Identities = 519/769 (67%), Gaps = 14/769 (2%)
Strand=Plus/Minus
Query 66001 GGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGAC 66060
||| || || | || ||||||||||| || || |||| || || | ||| ||||||||
Sbjct 2015149 GGGCAGCGCGATGGACGCGAGGTTGCACACCGCGGTCTCCTCCGGCGAGGTGTACTCGAC 2015090
Query 66061 AATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCG 66120
||| |||||||| || || | | || |||||||| | ||||| || || ||||||
Sbjct 2015089 AATCTCGGTGCAGAGGTTGGAGGATCGGATGGTGCCGAGGTTCTGCTGGTTGGACTTGCG 2015030
Query 66121 ATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGAT 66180
||||| ||||||||| | | ||||||||| | || |||||||| |||||||| | |||
Sbjct 2015029 GTTGCACGCATCCTTGAAGAGCATGTACGGGTTACCAGTCTCAACCTGGGACTCGAGGAT 2014970
Query 66181 GGCGTGCCAAAGAGC-GC-GTGCCTTCACCGTA--CGTACC---GCCCTACCTTTGCGTT 66233
|||| ||| |||| || | ||||| ||||| | |||| ||||| | || |
Sbjct 2014969 GGCGAACCA--GAGCTGCTGGGCCTTGACCGTCTTCTTACCCTTGCCCTCC----GCCT- 2014917
Query 66234 CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACT 66293
|||| | |||||| || ||||| || ||||| || | |||| || |
Sbjct 2014916 CGTACTTTTCGTACAGAGCCTCGAACTCCTCGCCCCAGCAATCCGCGAGACCCGGGGCTT 2014857
Query 66294 TGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAG 66353
|| || || | || | ||| || || | || || || ||| || |||||
Sbjct 2014856 CGTTGGGGCAGAAGAGGGTCCACTCGCCGTTAGCCTCGACGCGCTTCATGAACAGATCGT 2014797
Query 66354 GTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGC 66413
|||| ||| ||||||| || || | || || |||||| ||||||| || ||||
Sbjct 2014796 TGGTCCACAGGCCGTAGAACAGGTCCCTGGCACGCGCCTCCTCCTTGCCGTGGTTCTTGC 2014737
Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473
| | |||||| | || |||||||| || ||||| || || |||||||||||||| | ||
Sbjct 2014736 GGAGGTCGAGCCAGTCGAAGATGTCCGCGTGCCACGGCTCGAGGTAGATGGCGAATGCGC 2014677
Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533
| | | |||||||| || ||||||||||| | ||| | ||| ||||| || | ||
Sbjct 2014676 CTTTCCTCTTGCCGCCGCCCTGGTCGACGTACCTCGCGGTGTCGTTAAAGACGCGAAGCA 2014617
Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593
| || | || ||||| || | || ||||||||| |||| ||| || || |
Sbjct 2014616 TGGGGATGATGCCGTTGGAGGTTCCGTTGGTGCCGCGGATGTAGGAAGAGGTGGCGCGGA 2014557
Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCA 66653
| ||||| | |||||| || || ||||| | ||| |||||| || || || |
Sbjct 2014556 TGTCGTGGATGGACAGACCGATGCCGCCGGCGGACTTGGAGATGCACGCGCACTCCTTGA 2014497
Query 66654 CTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAA 66713
|| | | ||||| || ||||| || |||| |||| | |||| | || || |
Sbjct 2014496 GGGTATCGTAGATGCCCTCGATGGAATCCTCCTTCATGGCGATGAGGAAACACGACGACA 2014437
Query 66714 GTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGT 66762
| ||||| ||| || | | |||||| ||||| | ||||| ||
Sbjct 2014436 GCTGGGGGCGGGGGGTACCCGAGTTGAAGAGCGTGGGGGACGCGTGGGT 2014388
Score = 84.2 bits (92), Expect = 2e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493
|||||||||||| || || || ||| | ||||||||||| ||| || || ||| | ||
Sbjct 2015770 GAACTCGCCGGAGAGCACGCGGCGGGCGTAGATGTTGGAGGTGTACGGCTCGAAGCACTC 2015711
Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553
||||||| | ||| |||| || || || || |||||||| || |||| || |||||
Sbjct 2015710 GTTGTTGCCCAAAATCTGGGACGTGGACGCGGTGGGCATGGGCGCCACCAGCAGGGAGTT 2015651
Query 65554 TCGCAATCCGT 65564
|| | ||||
Sbjct 2015650 GCGGACGCCGT 2015640
>seq7
Length=1394110
Score = 187 bits (206), Expect = 2e-42
Identities = 555/843 (66%), Gaps = 20/843 (2%)
Strand=Plus/Plus
Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155
|||||||| ||||||| || || ||||||| | ||||||| |||| | |||| |||
Sbjct 899908 ATGTACAAGCAGGCGGAGGCGTCATTCTGGAGCGCGGAGGAGATCGACCTCTCCATGGAC 899967
Query 61156 ATGAATGACTGGGAG-CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214
|| ||||||| | || | | ||| | || || || ||||| || || | ||
Sbjct 899968 TACAAGGACTGGGTGACGCTGAACGA-CAACGAGCAGCACTTCATCTCGCACGTCCTCGC 900026
Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274
|||||| || || || ||||| ||||| ||||| || || ||| | ||||
Sbjct 900027 GTTCTTCGCGGCGTCTGACGGGATCGTGCTCGAGAACCTAGGCCTCCGGTTCATGAAGGA 900086
Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334
|| || || ||||||| || ||||||| || ||| | ||||| ||||| ||||
Sbjct 900087 CGTCCAGCTGCCGGAGGCTCGGGCGTTCTACGCGTTTCAGCTCGCCATCGAGAACATCCA 900146
Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG--AGCGGGCGGAACGTGAA 61392
|||||||| |||| | | |||||||| || ||| ||| || |||| | ||| | |
Sbjct 900147 CTCGGAGACGTACGGGTTGCTCATCGACACCTACGTCAAGGACAGCGTGAAGAAGAGGCA 900206
Query 61393 CGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTC 61452
| |||||| ||||| | | | || ||||| ||| || ||| | |||||| ||
Sbjct 900207 C--CTGTTCAGGGCCATTCACAACGTGCCCACGGTGGCGCGCAAGGCGCAGTGGGCCCTC 900264
Query 61453 AATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTC 61512
|| ||||| ||||| | ||| || | || ||| || |||| || ||| ||
Sbjct 900265 AAGTGGAT--CCAGT-CCTCGGAGTGTTTCGCCGAGCGACTGGTGGCGTTCGCGTGCGTG 900321
Query 61513 GAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTT 61572
||||| | || ||| ||||||||| ||||||||| ||| | ||||| || || ||
Sbjct 900322 GAGGGCATCTTCTTCTCCGGATCGTTTTGCGCAATCTTCTGGCTCAAGAAGCGCGGGCTC 900381
Query 61573 ATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGAT 61632
|||| ||| || |||||| ||| ||| | || || | ||||||||| | || || ||
Sbjct 900382 ATGCGCGGGCTCACCTTCTCCAACGAGCTCATCTCCAGGGACGAGGGCCTCCACTGCGAC 900441
Query 61633 TTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC-GTCG--GAGGAGCGTGTG 61689
|| || | || || | || || | || | || ||| | ||| ||
Sbjct 900442 TTCGC---CTGCCTCCTCTA---CTCCATGCTCAAGCACCCTCTCGATCCCGCGCGGCTG 900495
Query 61690 GGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCC 61749
||||| || || ||||| ||||| |||| ||| || || ||| || |
Sbjct 900496 CAGGAGATCGTCAAGGATGCGGTGGACATCGAGAAGGAGTTTGTGTGCGATGCTCTGTCG 900555
Query 61750 GTCTCACTCATCGGCATGAATTGTGGA-CTAATGTCGCAGTATATTGAATTTGTTGCCGA 61808
| | ||| | |||||||| | ||| || ||||| |||| || || ||||| || ||
Sbjct 900556 TGCGCGCTCGTGGGCATGAA-CGCGGATCTCATGTCCGAGTACATCGAGTTTGTCGCGGA 900614
Query 61809 CCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTT 61868
||| ||| || | | || || || | | | || || ||||| || || |
Sbjct 900615 CCGCCTGATGACGCAGCTCGGCGTGGAGAAGGTGTGGAACACCCCCAACCCGTTCGAGTG 900674
Query 61869 CATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTA 61928
||||| ||||| ||||| | |||||| |||| || |||||| | || || | | | ||
Sbjct 900675 GATGGAGATGATATCGCTCCAGGGCAAGGCGAACTTCTTCGAGCACCGGGTGGACCAGTA 900734
Query 61929 TCA 61931
|||
Sbjct 900735 TCA 900737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567907938160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |