Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_031903.1
Length=172345
Score E
Sequences producing significant alignments: (Bits) Value
seq19 794 0.0
>seq19
Length=72585
Score = 794 bits (880), Expect = 0.0
Identities = 765/977 (78%), Gaps = 6/977 (1%)
Strand=Plus/Plus
Query 159812 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTGATGATCCCA 159871
||| | ||||| || | ||||| || || ||||||||||||| || | ||||||||
Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243
Query 159872 ACTCTGTTGGCAGCAACTATCTG-CTTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGA 159930
||| | | |||||||| || | |||||||| || || || |||||||| ||||| ||
Sbjct 10244 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302
Query 159931 CATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAACATCATCTC 159990
|||||||| |||||||| || || |||| ||||| |||||||| ||||||||||||||
Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362
Query 159991 TGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCATTTGGGAAGC 160050
|||||| || | || | || ||||| || || ||||||||||| || || ||||||||
Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422
Query 160051 CGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGTCTTCCACTT 160110
|| || || || |||||||| || ||||||||||||| ||| || | || | |||||
Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482
Query 160111 CCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTAT 160170
| | ||||| || | | | || ||||||||||||||||| || |||| |||| | || ||
Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542
Query 160171 GCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGCTGTATTCCT 160230
|||||| ||||| ||| || ||||||||||| || || || || | ||||||||| |
Sbjct 10543 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 10602
Query 160231 CGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 160290
||| ||||| ||||||||||||||||||| |||| |||||||||||||| ||||| ||
Sbjct 10603 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 10662
Query 160291 TTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACAT 160350
||| |||| ||| | |||||||| || || ||||| ||||||||||| || ||||||||
Sbjct 10663 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 10722
Query 160351 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGGATCTCTGGT 160410
||| ||||||||||| ||||||||||| || || |||||||| ||||| || || || ||
Sbjct 10723 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 10782
Query 160411 TACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTT 160470
||||| |||| || | ||||| || || | ||||| ||| || ||||||||
Sbjct 10783 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 10842
Query 160471 CGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGAT 160530
||| ||||| |||||||||||||||||||| || ||||| || |||||||| ||| | ||
Sbjct 10843 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 10902
Query 160531 CTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGCTGCTTGGCC 160590
||||||||| || || || ||||||||||| || || |||||||||||||| |||||
Sbjct 10903 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 10962
Query 160591 TGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAATCTCAATGG 160650
|| | |||||||||||||| || | ||| |||| || ||||| ||||| || || ||
Sbjct 10963 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 11022
Query 160651 TTTCAACTTCAACCAGTCCATCTTGGA--CAACCAAGGACAAGTTCTGAACACTTGGGCA 160708
||||||||||||||||| | | || ||| | |||| || | ||||| |||||
Sbjct 11023 ATTCAACTTCAACCAGTCTGTAGTAGATTCAA--ACGGACGTGTAATTAACACATGGGCT 11080
Query 160709 GACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCTCACAAC 160768
|| | | ||||| ||| || || |||||||| ||||||||||||||||||||||||
Sbjct 11081 GATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 11140
Query 160769 TTCCCTCTCGACCTTGC 160785
||||| || ||||||||
Sbjct 11141 TTCCCACTTGACCTTGC 11157
Score = 794 bits (880), Expect = 0.0
Identities = 765/977 (78%), Gaps = 6/977 (1%)
Strand=Plus/Minus
Query 159812 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTGATGATCCCA 159871
||| | ||||| || | ||||| || || ||||||||||||| || | ||||||||
Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900
Query 159872 ACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGA 159930
||| | | |||||||| || | |||||||| || || || |||||||| ||||| ||
Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841
Query 159931 CATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAACATCATCTC 159990
|||||||| |||||||| || || |||| ||||| |||||||| ||||||||||||||
Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781
Query 159991 TGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCATTTGGGAAGC 160050
|||||| || | || | || ||||| || || ||||||||||| || || ||||||||
Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721
Query 160051 CGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGTCTTCCACTT 160110
|| || || || |||||||| || ||||||||||||| ||| || | || | |||||
Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661
Query 160111 CCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTAT 160170
| | ||||| || | | | || ||||||||||||||||| || |||| |||| | || ||
Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601
Query 160171 GCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGCTGTATTCCT 160230
|||||| ||||| ||| || ||||||||||| || || || || | ||||||||| |
Sbjct 36600 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 36541
Query 160231 CGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 160290
||| ||||| ||||||||||||||||||| |||| |||||||||||||| ||||| ||
Sbjct 36540 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 36481
Query 160291 TTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACAT 160350
||| |||| ||| | |||||||| || || ||||| ||||||||||| || ||||||||
Sbjct 36480 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 36421
Query 160351 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGGATCTCTGGT 160410
||| ||||||||||| ||||||||||| || || |||||||| ||||| || || || ||
Sbjct 36420 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 36361
Query 160411 TACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTT 160470
||||| |||| || | ||||| || || | ||||| ||| || ||||||||
Sbjct 36360 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 36301
Query 160471 CGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGAT 160530
||| ||||| |||||||||||||||||||| || ||||| || |||||||| ||| | ||
Sbjct 36300 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 36241
Query 160531 CTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGCTGCTTGGCC 160590
||||||||| || || || ||||||||||| || || |||||||||||||| |||||
Sbjct 36240 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 36181
Query 160591 TGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAATCTCAATGG 160650
|| | |||||||||||||| || | ||| |||| || ||||| ||||| || || ||
Sbjct 36180 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 36121
Query 160651 TTTCAACTTCAACCAGTCCATCTTGGA--CAACCAAGGACAAGTTCTGAACACTTGGGCA 160708
||||||||||||||||| | | || ||| | |||| || | ||||| |||||
Sbjct 36120 ATTCAACTTCAACCAGTCTGTAGTAGATTCAA--ACGGACGTGTAATTAACACATGGGCT 36063
Query 160709 GACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCTCACAAC 160768
|| | | ||||| ||| || || |||||||| ||||||||||||||||||||||||
Sbjct 36062 GATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 36003
Query 160769 TTCCCTCTCGACCTTGC 160785
||||| || ||||||||
Sbjct 36002 TTCCCACTTGACCTTGC 35986
Score = 601 bits (666), Expect = 4e-167
Identities = 747/1020 (73%), Gaps = 2/1020 (0%)
Strand=Plus/Plus
Query 161509 GGGTGGTTCGATGTCCTTGACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGCTGG 161568
|| ||||| || | | |||||||||||||| || ||||||||||| || || || |||
Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048
Query 161569 TCTGGACTTCTTCTTTTTCCCA-CTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCAC 161627
|| ||| || || || |||||| ||| || |||| |||| || ||| ||||||| ||
Sbjct 2049 TCAGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107
Query 161628 GACTTTCGCTACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTTGAGGGTGCAAA 161687
|| |||| || ||||| || || || | || ||||| || |||||||| ||
Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167
Query 161688 TTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTTCT 161747
|| |||||| ||||||| || ||| || || ||||| ||| || |||||||| ||
Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227
Query 161748 CTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGAA 161807
||||| || || || ||||| || ||| | ||| || ||||| ||| | ||||
Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287
Query 161808 TTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACT 161867
|| || || || ||||| || |||| | || ||||| ||||| ||||| |||||| |
Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347
Query 161868 TGCTCGTCTTATCGGTATCCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGT 161927
||| ||| | || ||||| ||||| || ||||| ||||| | ||||| |||||
Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407
Query 161928 TTTTGTCAGCGTCTTTCTCATATATCCTCTGGGACAGTCGTCCTGGTTCTTCGCGCCATC 161987
||||| || || || || || || || ||||| || |||||||| || || ||
Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467
Query 161988 GTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTTTCCTACAAGGTTTCCACAATTGGAC 162047
||||| || || | |||||| | ||| | |||||| | ||||| |||||||| |||||
Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527
Query 162048 GCTTAATCCGTTCCACATGATGGGTGTCGCAGGTATCTTGGGTGGTGCTTTGCTCTCTGC 162107
||||| || |||||||||||||| || || ||| | | || | || | || | |||
Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587
Query 162108 TATTCACGGTGTGACTGTTGAAAACACGCTCTACCAAGATGGTGAACAAGCAAATACTTT 162167
|||||||| | ||||| || ||||| || | | |||||||||| |||| |||||
Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647
Query 162168 CAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTACTGCGAACCGTTT 162227
| || ||| || | || |||| || ||||||||||| ||||| || || ||||||||
Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707
Query 162228 CTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTGCATTTCTTTATGCT 162287
|||||||||||| |||||| | ||||| ||| ||||||||| | || |||||||||||
Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767
Query 162288 CTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTTAA 162347
||||| || || | || | |||| | | ||| || | ||| | || |||||
Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAA 2827
Query 162348 TCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGAGGATCCTGAATTTGA 162407
|| ||||| |||||||| ||||| || ||||| |||||||| || |||||||| |||||
Sbjct 2828 CCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGA 2887
Query 162408 AACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGCATGGTTGGCACCAGT 162467
||| |||||||| |||||||| || | || |||||| ||||||||||| ||||| |
Sbjct 2888 AACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCA 2947
Query 162468 TGATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCCTAGAGGTAACGCACT 162527
||||| || ||||| ||| |||||||||||||||| || || || | || ||||| ||
Sbjct 2948 AGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 3007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 551375869048200
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