Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq19 829 0.0 >seq19 Length=72585 Score = 829 bits (918), Expect = 0.0 Identities = 781/988 (79%), Gaps = 8/988 (1%) Strand=Plus/Plus Query 188859 ATGGGTCACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTCCTGATGATCCC 188918 |||| | || || ||| | |||||||| || ||||||||||||| || | |||||||| Sbjct 10183 ATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCC 10242 Query 188919 TACGCTTCTCGCTGCAACCATCTG-CTTCATCGTCGCCTTTGTCGCTGCACCCCCTGTAG 188977 ||| | || | |||| | || | |||||||| || ||| | ||||| || ||||||| Sbjct 10243 TACTTTACTTACAGCAA-CTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAG 10301 Query 188978 ACATTGATGGCATCCGCGAACCCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCT 189037 | || ||||| ||||| || || || |||| ||||| ||||| |||||||||||||||| Sbjct 10302 ATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCT 10361 Query 189038 CTGGTGCTGTTGTCCCTTCATCCAACGCAATTGGTCTTCACTTCTACCCCATCTGGGAAG 189097 |||||||||| ||||| |||| ||||| || || |||||||||||||| |||||||||| Sbjct 10362 CTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 10421 Query 189098 CCGCCTCACTCGATGAGTGGCTCTACAACGGTGGTCCTTTCCAACTGGTAGTCTTCCACT 189157 | || || || ||||||||||| |||||||||||||||| ||| || | || | |||| Sbjct 10422 CAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACT 10481 Query 189158 TCCTCATCGGCATCTACGCCTACATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTA 189217 || ||||||| || | | |||||||||||||||||||| || |||| |||| | || | Sbjct 10482 TCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAA 10541 Query 189218 TGCGTCCTTGGATCTGC-ATTGCTTACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTT 189276 ||||||||||||| ||| | ||||||||||| ||||| ||||||||| | || || || Sbjct 10542 TGCGTCCTTGGAT-TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTC 10600 Query 189277 CTGGTCTATCCTTTTGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGA 189336 | || || || | ||||| |||||||||||||| | |||||| | ||||| |||| Sbjct 10601 ATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGA 10660 Query 189337 ACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCAC 189396 || ||||||| |||| | || ||||| || |||||||||||||| |||||||| |||||| Sbjct 10661 ACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCAC 10720 Query 189397 ATGCTGGGAGTCGCAGGTGTCTTCGGTGGTTCACTGTTCTCCGCAATGCATGGTTCACTC 189456 ||||| || || || ||||| |||||||||||||| ||||| |||||||| ||||||||| Sbjct 10721 ATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTC 10780 Query 189457 GTTACCTCTTCACTGGTTCGTGAAACCACTGAAACCGAGTCCCAGAACTATGGTTACAAG 189516 || || || || || | ||||| || ||||| | |||||| ||| || |||||| Sbjct 10781 GTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAG 10840 Query 189517 TTTGGACAAGAAGAAGAAACGTACAACATCGTTGCTGCTCATGGATATTTCGGTCGTCTT 189576 || |||||||||||||| || ||||||||||| ||||| || || || ||||| |||||| Sbjct 10841 TTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTT 10900 Query 189577 ATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTCGCTGCCTGG 189636 ||||||||||| || || ||||||||||| |||||||| |||||||||||||| |||| Sbjct 10901 ATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGG 10960 Query 189637 CCAGTCGTGGGTATCTGGTTTACCGCCCTCGGCGTCAGCACCATGGCATTCAACCTCAAT 189696 ||||| |||| |||||||| || || | || | || ||||| |||||||| || Sbjct 10961 CCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAAC 11020 Query 189697 GGGTTCAACTTCAATCAATCCATTCTTGATGGTCAA--GGTCGTGTTCTGAACACATGGG 189754 || ||||||||||| || || | | ||| |||| || ||||| | |||||||||| Sbjct 11021 GGATTCAACTTCAACCAGTCTGTAGTAGAT--TCAAACGGACGTGTAATTAACACATGGG 11078 Query 189755 CAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACGCTCACA 189814 | || | | ||||||||| || ||||||||||| ||||| |||||||||||||||| Sbjct 11079 CTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACA 11138 Query 189815 ACTTCCCTCTTGATCTGGCAGCAGCAGA 189842 ||||||| ||||| || ||| | | ||| Sbjct 11139 ACTTCCCACTTGACCTTGCATCTGTAGA 11166 Score = 829 bits (918), Expect = 0.0 Identities = 781/988 (79%), Gaps = 8/988 (1%) Strand=Plus/Minus Query 188859 ATGGGTCACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTCCTGATGATCCC 188918 |||| | || || ||| | |||||||| || ||||||||||||| || | |||||||| Sbjct 36960 ATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCC 36901 Query 188919 TACGCTTCTCGCTGCAACCATCTGC-TTCATCGTCGCCTTTGTCGCTGCACCCCCTGTAG 188977 ||| | || | ||||| || | |||||||| || ||| | ||||| || ||||||| Sbjct 36900 TACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAG 36842 Query 188978 ACATTGATGGCATCCGCGAACCCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCT 189037 | || ||||| ||||| || || || |||| ||||| ||||| |||||||||||||||| Sbjct 36841 ATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCT 36782 Query 189038 CTGGTGCTGTTGTCCCTTCATCCAACGCAATTGGTCTTCACTTCTACCCCATCTGGGAAG 189097 |||||||||| ||||| |||| ||||| || || |||||||||||||| |||||||||| Sbjct 36781 CTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 36722 Query 189098 CCGCCTCACTCGATGAGTGGCTCTACAACGGTGGTCCTTTCCAACTGGTAGTCTTCCACT 189157 | || || || ||||||||||| |||||||||||||||| ||| || | || | |||| Sbjct 36721 CAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACT 36662 Query 189158 TCCTCATCGGCATCTACGCCTACATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTA 189217 || ||||||| || | | |||||||||||||||||||| || |||| |||| | || | Sbjct 36661 TCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAA 36602 Query 189218 TGCGTCCTTGGATCTGCATT-GCTTACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTT 189276 ||||||||||||| ||| | ||||||||||| ||||| ||||||||| | || || || Sbjct 36601 TGCGTCCTTGGAT-TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTC 36543 Query 189277 CTGGTCTATCCTTTTGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGA 189336 | || || || | ||||| |||||||||||||| | |||||| | ||||| |||| Sbjct 36542 ATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGA 36483 Query 189337 ACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCAC 189396 || ||||||| |||| | || ||||| || |||||||||||||| |||||||| |||||| Sbjct 36482 ACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCAC 36423 Query 189397 ATGCTGGGAGTCGCAGGTGTCTTCGGTGGTTCACTGTTCTCCGCAATGCATGGTTCACTC 189456 ||||| || || || ||||| |||||||||||||| ||||| |||||||| ||||||||| Sbjct 36422 ATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTC 36363 Query 189457 GTTACCTCTTCACTGGTTCGTGAAACCACTGAAACCGAGTCCCAGAACTATGGTTACAAG 189516 || || || || || | ||||| || ||||| | |||||| ||| || |||||| Sbjct 36362 GTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAG 36303 Query 189517 TTTGGACAAGAAGAAGAAACGTACAACATCGTTGCTGCTCATGGATATTTCGGTCGTCTT 189576 || |||||||||||||| || ||||||||||| ||||| || || || ||||| |||||| Sbjct 36302 TTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTT 36243 Query 189577 ATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTCGCTGCCTGG 189636 ||||||||||| || || ||||||||||| |||||||| |||||||||||||| |||| Sbjct 36242 ATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGG 36183 Query 189637 CCAGTCGTGGGTATCTGGTTTACCGCCCTCGGCGTCAGCACCATGGCATTCAACCTCAAT 189696 ||||| |||| |||||||| || || | || | || ||||| |||||||| || Sbjct 36182 CCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAAC 36123 Query 189697 GGGTTCAACTTCAATCAATCCATTCTTGATGGTCAA--GGTCGTGTTCTGAACACATGGG 189754 || ||||||||||| || || | | ||| |||| || ||||| | |||||||||| Sbjct 36122 GGATTCAACTTCAACCAGTCTGTAGTAGAT--TCAAACGGACGTGTAATTAACACATGGG 36065 Query 189755 CAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACGCTCACA 189814 | || | | ||||||||| || ||||||||||| ||||| |||||||||||||||| Sbjct 36064 CTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACA 36005 Query 189815 ACTTCCCTCTTGATCTGGCAGCAGCAGA 189842 ||||||| ||||| || ||| | | ||| Sbjct 36004 ACTTCCCACTTGACCTTGCATCTGTAGA 35977 Score = 598 bits (662), Expect = 5e-166 Identities = 745/1018 (73%), Gaps = 2/1018 (0%) Strand=Plus/Plus Query 189983 ATGGTTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTC 190042 ||||||||||| | | || ||||||||||| || ||||| || || || || |||||||| Sbjct 1991 ATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGGTC 2050 Query 190043 TGGATTACTTCTTTTTCCCA-CTGCTTATCTCGCAATTGGTGGCTGGCTTACTGGCACGA 190101 ||| | || || |||||| ||| || | ||| ||||||| ||| ||||||| || | Sbjct 2051 AGGAAT-TTTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAACAA 2109 Query 190102 CGTTTGCTACAAGCTGGTACACCCACGGACTCGCAAGTAGTTACCTTGAGGGTGCTAATT 190161 | || | || |||||||| ||||| | |||||| ||||||||||| ||| | Sbjct 2110 CATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAACT 2169 Query 190162 TTCTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTT 190221 | |||||| |||| || ||||| || || | ||||| ||| || |||||||| |||| Sbjct 2170 TCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCTTT 2229 Query 190222 GGGGTCCTGAATCTCAAGGCGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTT 190281 |||| || ||| | ||||| || ||| | ||| || ||||| ||| | ||| | | Sbjct 2230 GGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGACAT 2289 Query 190282 TTGTGGCGCTCCACGGGGCTTTCGCTCTAATTGGATTCATGCTTCGTCAGTTTGAACTGG 190341 | || || || ||||| || |||| |||| ||||| ||||| ||||| |||||| | | Sbjct 2290 TCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAATTG 2349 Query 190342 CACGTCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTT 190401 ||||| | || ||||| ||||| || ||||| ||||| | ||||||||||| | Sbjct 2350 CACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGTAT 2409 Query 190402 TTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTCTTCGCGCCATCCT 190461 |||| || || || || ||||| || || ||||| | |||||||| || || || | Sbjct 2410 TTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTCAT 2469 Query 190462 TCGGTGTGGCAGCGATCTTCCGCTTCCTCCTCTTCTTGCAGGGCTTCCATAACTGGACGC 190521 | ||||| || | || ||||| ||| | || ||||| || || ||||| |||||||| | Sbjct 2470 TTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGACAC 2529 Query 190522 TGAACCCCTTCCACATGATGGGTGTTGCAGGTATCCTGGGAGGAGCACTACTGTCAGCAA 190581 | ||||| |||||||||||||| || || ||| | || |||| |||||| || | || | Sbjct 2530 TTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGCGA 2589 Query 190582 TCCATGGTGTGACTGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACGTTTA 190641 | || || | ||||||||||| || | | ||||||||||| ||||||| || Sbjct 2590 TTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTTCC 2649 Query 190642 AAGCATTCGACTCTACACAAGAGGAAGAGACCTATTCGATGGTCACTGCCAACCGTTTCT 190701 ||||| || | || |||| |||||||| || || ||||| || || |||||||||| Sbjct 2650 GTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTTCT 2709 Query 190702 GGTCTCAAATCTTTGGTGTTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTCT 190761 |||| || || || ||||| || ||| ||| ||| | ||| | || ||||||||||| | Sbjct 2710 GGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCTTT 2769 Query 190762 TTGTTCCTGTTATGGGTCTGTGGACTTCTTCCATCGGTATTATTGGTCTTGCTCTCAACC 190821 | || ||||| | || | |||| || | | ||| || | || | || || |||| Sbjct 2770 TCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAACC 2829 Query 190822 TTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTCGAGA 190881 | ||||| || ||||| ||||| ||||||||| | ||||| |||||||| ||||| || | Sbjct 2830 TCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGAAA 2889 Query 190882 CTTTTTACACAAAAAATATACTTTTGAATGAAGGTCTTCGTTCATGGTTGGCACCTGTTG 190941 | || ||||| || ||||| ||| | || |||||| ||||| ||||| ||||| || | Sbjct 2890 CATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCAAG 2949 Query 190942 ATCAACCCCATGAGAATTTTGTATTTCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 190999 |||| || ||||| || ||||||| || || || ||| | ||| | || |||||||| Sbjct 2950 ATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 3007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634079849406000