Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq19 845 0.0 >seq19 Length=72585 Score = 845 bits (936), Expect = 0.0 Identities = 776/976 (80%), Gaps = 4/976 (0%) Strand=Plus/Plus Query 160581 TGGGTAACTTCTACAAACAATCGTCTTTACGTCGGTTGGTTCGGTGTGCTGATGATCCCA 160640 ||| | ||||| || | || ||||||||| ||||||||||||| || | |||||||| Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243 Query 160641 ACTCTGTTGGCAGCAACCGTCTGCTTTATTACT-GCGTTCGTTGCTGCTCCCCCCGTGGA 160699 ||| | | ||||||| || | || | | || || |||||||||| || || || Sbjct 10244 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302 Query 160700 CATCGACGGTATCCGTGAACCCGTTGCTGGTTCACTGATGTATGGAAACAACATCATCTC 160759 ||||| ||||||||||| || || |||| ||||| ||||| ||||||||||||||||| Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362 Query 160760 TGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGC 160819 |||||| || | ||| | || ||||| || || |||||||||||||| || |||||||| Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422 Query 160820 TGCATCTCTTGATGAATGGCTCTACAATGGTGGTCCTTACCAACTGGTCGTATTTCACTT 160879 || ||||||||||| ||||| ||||| |||||||||||||| || |||||| |||||| Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482 Query 160880 CCTGATCGGCATCTTCTGCTACATGGGTCGCGAGTGGGAACTTTCCTACCGCCTCGGCAT 160939 | | ||||| || | | ||||||||||| |||||||| ||||| | ||| | || || Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542 Query 160940 GCGCCCCTGGATCTGC-GTTGCATATTCTGCACCTGTTGCTGCTGCGAGTGCAGTATTCC 160998 ||| || ||||| ||| || || || ||||| ||||| || || || | || |||||| Sbjct 10543 GCGTCCTTGGAT-TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 10601 Query 160999 TCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGGTATGCCCCTGGGTATCTCTGGTA 161058 |||| || || ||||||| ||||||||||||||||| ||||| || ||||| ||||| | Sbjct 10602 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 10661 Query 161059 CCTTCAACTTCATGCTTGTCTTCCAGGCAGAACACAACATCCTGATGCACCCCTTCCACA 161118 | |||||||||||| | || |||||||| || ||||||||||| |||||||| ||||||| Sbjct 10662 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 10721 Query 161119 TGTTGGGTGTTGCTGGTGTCTTCGGTGGTTCTCTGTTCTCCGCAATGCATGGTTCACTGG 161178 || | |||||||||||||| ||||||||||| || ||||| |||||||| |||||||| | Sbjct 10722 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 10781 Query 161179 TTACTTCTTCCCTGGTTCGTGAAACCACTGAGAACGAGTCCCAGAACTATGGTTACAAGT 161238 | ||||| || || | ||||| || |||||||||||||| ||| || ||||||| Sbjct 10782 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 10841 Query 161239 TTGGTCAAGAAGAAGAGACCTACAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGA 161298 | || |||||||||||||| ||||||||||| ||||| || ||||||||||| || || | Sbjct 10842 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 10901 Query 161299 TCTTCCAATACGCTTCCTTCAACAACTCCCGTTCGTTGCACTTCTTCCTCGCAGCATGGC 161358 |||||||||||||||| ||||||||||| ||||| | ||||||||||||||| |||| Sbjct 10902 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 10961 Query 161359 CTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCTCCACCATGGCATTCAACCTGAACG 161418 | || | || ||||||||||| || | ||| | || || ||||| |||||||| |||| Sbjct 10962 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 11021 Query 161419 GATTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCTG 161478 ||||||||||||||||||| | | ||| | || || | ||||| ||||||| Sbjct 11022 GATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTG 11081 Query 161479 ACGTTCTGAATCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACT 161538 | | | || ||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct 11082 ATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 11141 Query 161539 TCCCTCTGGATCTCGC 161554 |||| || || || || Sbjct 11142 TCCCACTTGACCTTGC 11157 Score = 845 bits (936), Expect = 0.0 Identities = 776/976 (80%), Gaps = 4/976 (0%) Strand=Plus/Minus Query 160581 TGGGTAACTTCTACAAACAATCGTCTTTACGTCGGTTGGTTCGGTGTGCTGATGATCCCA 160640 ||| | ||||| || | || ||||||||| ||||||||||||| || | |||||||| Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900 Query 160641 ACTCTGTTGGCAGCAACCGTCTGCTTTATTACT-GCGTTCGTTGCTGCTCCCCCCGTGGA 160699 ||| | | ||||||| || | || | | || || |||||||||| || || || Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841 Query 160700 CATCGACGGTATCCGTGAACCCGTTGCTGGTTCACTGATGTATGGAAACAACATCATCTC 160759 ||||| ||||||||||| || || |||| ||||| ||||| ||||||||||||||||| Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781 Query 160760 TGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGC 160819 |||||| || | ||| | || ||||| || || |||||||||||||| || |||||||| Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721 Query 160820 TGCATCTCTTGATGAATGGCTCTACAATGGTGGTCCTTACCAACTGGTCGTATTTCACTT 160879 || ||||||||||| ||||| ||||| |||||||||||||| || |||||| |||||| Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661 Query 160880 CCTGATCGGCATCTTCTGCTACATGGGTCGCGAGTGGGAACTTTCCTACCGCCTCGGCAT 160939 | | ||||| || | | ||||||||||| |||||||| ||||| | ||| | || || Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601 Query 160940 GCGCCCCTGGATCTGC-GTTGCATATTCTGCACCTGTTGCTGCTGCGAGTGCAGTATTCC 160998 ||| || ||||| ||| || || || ||||| ||||| || || || | || |||||| Sbjct 36600 GCGTCCTTGGAT-TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 36542 Query 160999 TCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGGTATGCCCCTGGGTATCTCTGGTA 161058 |||| || || ||||||| ||||||||||||||||| ||||| || ||||| ||||| | Sbjct 36541 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 36482 Query 161059 CCTTCAACTTCATGCTTGTCTTCCAGGCAGAACACAACATCCTGATGCACCCCTTCCACA 161118 | |||||||||||| | || |||||||| || ||||||||||| |||||||| ||||||| Sbjct 36481 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 36422 Query 161119 TGTTGGGTGTTGCTGGTGTCTTCGGTGGTTCTCTGTTCTCCGCAATGCATGGTTCACTGG 161178 || | |||||||||||||| ||||||||||| || ||||| |||||||| |||||||| | Sbjct 36421 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 36362 Query 161179 TTACTTCTTCCCTGGTTCGTGAAACCACTGAGAACGAGTCCCAGAACTATGGTTACAAGT 161238 | ||||| || || | ||||| || |||||||||||||| ||| || ||||||| Sbjct 36361 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 36302 Query 161239 TTGGTCAAGAAGAAGAGACCTACAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGA 161298 | || |||||||||||||| ||||||||||| ||||| || ||||||||||| || || | Sbjct 36301 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 36242 Query 161299 TCTTCCAATACGCTTCCTTCAACAACTCCCGTTCGTTGCACTTCTTCCTCGCAGCATGGC 161358 |||||||||||||||| ||||||||||| ||||| | ||||||||||||||| |||| Sbjct 36241 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 36182 Query 161359 CTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCTCCACCATGGCATTCAACCTGAACG 161418 | || | || ||||||||||| || | ||| | || || ||||| |||||||| |||| Sbjct 36181 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 36122 Query 161419 GATTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCTG 161478 ||||||||||||||||||| | | ||| | || || | ||||| ||||||| Sbjct 36121 GATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTG 36062 Query 161479 ACGTTCTGAATCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACT 161538 | | | || ||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct 36061 ATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 36002 Query 161539 TCCCTCTGGATCTCGC 161554 |||| || || || || Sbjct 36001 TCCCACTTGACCTTGC 35986 Score = 614 bits (680), Expect = 6e-171 Identities = 752/1024 (73%), Gaps = 2/1024 (0%) Strand=Plus/Plus Query 163881 GGGTGGTTCGATGTCCTGGACGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGG 163940 || ||||| || | | |||||||||||||| || ||||| || || || || |||||| Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048 Query 163941 TCTGGATTACTTCTTTTTCCCA-CTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGTAC 163999 || ||| | || || |||||| ||| || ||||| ||||||| ||| ||||||| || Sbjct 2049 TCAGGAAT-TTTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107 Query 164000 AACGTTTGTTACCAGTTGGTACACCCACGGTCTCGCGTCTAGTTACCTTGAGGGTGCTAA 164059 ||| || || || |||||||| |||||| | || | ||||||||||| ||| Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167 Query 164060 TTTCCTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 164119 ||||||||| |||| || ||||| || || | ||||| ||| || |||||||| || Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227 Query 164120 TTGGGGTCCTGAGTCTCAGGGGGACTTCATTAGGTGGTGCCAACTTGGGGGACTCTGGGC 164179 |||||| || || | || || || |||| | ||||| || ||||| ||| | ||| | Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287 Query 164180 TTTTGTGGCGTTCCACGGATCTTTCGCTCTGATCGGTTTCATGCTTCGGCAGTTTGAAAT 164239 || || || | ||||| | |||| | ||||| || ||||| || || |||||||| Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347 Query 164240 TGCACGTCTTGTAGGTATCCGTCCGTACAATGCTATTGCGTTCTCTGGTCCGATTGCTGT 164299 ||||||| ||| || ||||||||||| || ||||| ||||| | || || ||||| Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407 Query 164300 CTTTGTCAGCGTTTTCCTTATGTACCCTCTCGGGCAATCTAGTTGGTTCTTTGCCCCCTC 164359 ||||| || |||||||| ||||| || || ||||| | ||||||||||| || || Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467 Query 164360 GTTTGGGGTCGCGGCGATCTTCAGATTCCTCTTGTTCCTCCAAGGTTTCCATAACTGGAC 164419 ||||| || |||| || ||| | ||| | | ||| ||||||| ||||| |||||||| Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527 Query 164420 ACTCAACCCCTTCCATATGATGGGTGTTGCAGGCATCCTTGGTGGTGCTCTTCTCTGTGC 164479 ||| ||||| ||||| |||||||| || || || | ||||| | || ||||| ||||| Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587 Query 164480 TATTCATGGTGCTACCGTAGAGAATACTTTGTTTGAAGATGGTGAACAATCAAATACTTT 164539 ||||| || || || |||||||| || | || ||||||||||| ||||| ||||| Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647 Query 164540 CAAGGCATTCGAGCCTACTCAAGAGGAAGAGACTTACTCGATGGTCACTGCCAACCGCTT 164599 | ||||| | || ||||||| |||||||||||||| ||||| || || ||||| || Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707 Query 164600 CTGGTCTCAGATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCT 164659 |||||| |||||||| ||| | |||||| || ||||||||| | |||||||||||||| Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767 Query 164660 CTTTGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTCAA 164719 || || ||||| | || | |||| | ||||| | | || | ||||| || Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAA 2827 Query 164720 TCTTCGTGCTTATGATTTTGTGTCTCAGGAGATTAGAGCAGCAGAGGATCCTGAATTTGA 164779 || ||||| || || || || || || ||||| | ||||| || |||||||| ||||| Sbjct 2828 CCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGA 2887 Query 164780 GACGTTCTATACGAAGAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGT 164839 || ||||| || ||||| || || || || ||||| | ||||| |||||||| | Sbjct 2888 AACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCA 2947 Query 164840 AGACCAGCCACACGAATCGTTTGTATTTCCAGAGGAAGTTCTTCCGAGAGGTAACGCACT 164899 ||| ||||| || ||| ||||||| || ||||| || ||||| | || ||||| || Sbjct 2948 AGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 3007 Query 164900 CTAA 164903 ||| Sbjct 3008 TTAA 3011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559327867159600