Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_031922.1
Length=174830
Score E
Sequences producing significant alignments: (Bits) Value
seq19 845 0.0
>seq19
Length=72585
Score = 845 bits (936), Expect = 0.0
Identities = 776/976 (80%), Gaps = 4/976 (0%)
Strand=Plus/Plus
Query 160581 TGGGTAACTTCTACAAACAATCGTCTTTACGTCGGTTGGTTCGGTGTGCTGATGATCCCA 160640
||| | ||||| || | || ||||||||| ||||||||||||| || | ||||||||
Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243
Query 160641 ACTCTGTTGGCAGCAACCGTCTGCTTTATTACT-GCGTTCGTTGCTGCTCCCCCCGTGGA 160699
||| | | ||||||| || | || | | || || |||||||||| || || ||
Sbjct 10244 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302
Query 160700 CATCGACGGTATCCGTGAACCCGTTGCTGGTTCACTGATGTATGGAAACAACATCATCTC 160759
||||| ||||||||||| || || |||| ||||| ||||| |||||||||||||||||
Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362
Query 160760 TGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGC 160819
|||||| || | ||| | || ||||| || || |||||||||||||| || ||||||||
Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422
Query 160820 TGCATCTCTTGATGAATGGCTCTACAATGGTGGTCCTTACCAACTGGTCGTATTTCACTT 160879
|| ||||||||||| ||||| ||||| |||||||||||||| || |||||| ||||||
Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482
Query 160880 CCTGATCGGCATCTTCTGCTACATGGGTCGCGAGTGGGAACTTTCCTACCGCCTCGGCAT 160939
| | ||||| || | | ||||||||||| |||||||| ||||| | ||| | || ||
Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542
Query 160940 GCGCCCCTGGATCTGC-GTTGCATATTCTGCACCTGTTGCTGCTGCGAGTGCAGTATTCC 160998
||| || ||||| ||| || || || ||||| ||||| || || || | || ||||||
Sbjct 10543 GCGTCCTTGGAT-TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 10601
Query 160999 TCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGGTATGCCCCTGGGTATCTCTGGTA 161058
|||| || || ||||||| ||||||||||||||||| ||||| || ||||| ||||| |
Sbjct 10602 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 10661
Query 161059 CCTTCAACTTCATGCTTGTCTTCCAGGCAGAACACAACATCCTGATGCACCCCTTCCACA 161118
| |||||||||||| | || |||||||| || ||||||||||| |||||||| |||||||
Sbjct 10662 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 10721
Query 161119 TGTTGGGTGTTGCTGGTGTCTTCGGTGGTTCTCTGTTCTCCGCAATGCATGGTTCACTGG 161178
|| | |||||||||||||| ||||||||||| || ||||| |||||||| |||||||| |
Sbjct 10722 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 10781
Query 161179 TTACTTCTTCCCTGGTTCGTGAAACCACTGAGAACGAGTCCCAGAACTATGGTTACAAGT 161238
| ||||| || || | ||||| || |||||||||||||| ||| || |||||||
Sbjct 10782 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 10841
Query 161239 TTGGTCAAGAAGAAGAGACCTACAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGA 161298
| || |||||||||||||| ||||||||||| ||||| || ||||||||||| || || |
Sbjct 10842 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 10901
Query 161299 TCTTCCAATACGCTTCCTTCAACAACTCCCGTTCGTTGCACTTCTTCCTCGCAGCATGGC 161358
|||||||||||||||| ||||||||||| ||||| | ||||||||||||||| ||||
Sbjct 10902 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 10961
Query 161359 CTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCTCCACCATGGCATTCAACCTGAACG 161418
| || | || ||||||||||| || | ||| | || || ||||| |||||||| ||||
Sbjct 10962 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 11021
Query 161419 GATTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCTG 161478
||||||||||||||||||| | | ||| | || || | ||||| |||||||
Sbjct 11022 GATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTG 11081
Query 161479 ACGTTCTGAATCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACT 161538
| | | || ||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 11082 ATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 11141
Query 161539 TCCCTCTGGATCTCGC 161554
|||| || || || ||
Sbjct 11142 TCCCACTTGACCTTGC 11157
Score = 845 bits (936), Expect = 0.0
Identities = 776/976 (80%), Gaps = 4/976 (0%)
Strand=Plus/Minus
Query 160581 TGGGTAACTTCTACAAACAATCGTCTTTACGTCGGTTGGTTCGGTGTGCTGATGATCCCA 160640
||| | ||||| || | || ||||||||| ||||||||||||| || | ||||||||
Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900
Query 160641 ACTCTGTTGGCAGCAACCGTCTGCTTTATTACT-GCGTTCGTTGCTGCTCCCCCCGTGGA 160699
||| | | ||||||| || | || | | || || |||||||||| || || ||
Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841
Query 160700 CATCGACGGTATCCGTGAACCCGTTGCTGGTTCACTGATGTATGGAAACAACATCATCTC 160759
||||| ||||||||||| || || |||| ||||| ||||| |||||||||||||||||
Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781
Query 160760 TGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGC 160819
|||||| || | ||| | || ||||| || || |||||||||||||| || ||||||||
Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721
Query 160820 TGCATCTCTTGATGAATGGCTCTACAATGGTGGTCCTTACCAACTGGTCGTATTTCACTT 160879
|| ||||||||||| ||||| ||||| |||||||||||||| || |||||| ||||||
Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661
Query 160880 CCTGATCGGCATCTTCTGCTACATGGGTCGCGAGTGGGAACTTTCCTACCGCCTCGGCAT 160939
| | ||||| || | | ||||||||||| |||||||| ||||| | ||| | || ||
Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601
Query 160940 GCGCCCCTGGATCTGC-GTTGCATATTCTGCACCTGTTGCTGCTGCGAGTGCAGTATTCC 160998
||| || ||||| ||| || || || ||||| ||||| || || || | || ||||||
Sbjct 36600 GCGTCCTTGGAT-TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 36542
Query 160999 TCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGGTATGCCCCTGGGTATCTCTGGTA 161058
|||| || || ||||||| ||||||||||||||||| ||||| || ||||| ||||| |
Sbjct 36541 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 36482
Query 161059 CCTTCAACTTCATGCTTGTCTTCCAGGCAGAACACAACATCCTGATGCACCCCTTCCACA 161118
| |||||||||||| | || |||||||| || ||||||||||| |||||||| |||||||
Sbjct 36481 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 36422
Query 161119 TGTTGGGTGTTGCTGGTGTCTTCGGTGGTTCTCTGTTCTCCGCAATGCATGGTTCACTGG 161178
|| | |||||||||||||| ||||||||||| || ||||| |||||||| |||||||| |
Sbjct 36421 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 36362
Query 161179 TTACTTCTTCCCTGGTTCGTGAAACCACTGAGAACGAGTCCCAGAACTATGGTTACAAGT 161238
| ||||| || || | ||||| || |||||||||||||| ||| || |||||||
Sbjct 36361 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 36302
Query 161239 TTGGTCAAGAAGAAGAGACCTACAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGA 161298
| || |||||||||||||| ||||||||||| ||||| || ||||||||||| || || |
Sbjct 36301 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 36242
Query 161299 TCTTCCAATACGCTTCCTTCAACAACTCCCGTTCGTTGCACTTCTTCCTCGCAGCATGGC 161358
|||||||||||||||| ||||||||||| ||||| | ||||||||||||||| ||||
Sbjct 36241 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 36182
Query 161359 CTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCTCCACCATGGCATTCAACCTGAACG 161418
| || | || ||||||||||| || | ||| | || || ||||| |||||||| ||||
Sbjct 36181 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 36122
Query 161419 GATTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCTG 161478
||||||||||||||||||| | | ||| | || || | ||||| |||||||
Sbjct 36121 GATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTG 36062
Query 161479 ACGTTCTGAATCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACT 161538
| | | || ||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 36061 ATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 36002
Query 161539 TCCCTCTGGATCTCGC 161554
|||| || || || ||
Sbjct 36001 TCCCACTTGACCTTGC 35986
Score = 614 bits (680), Expect = 6e-171
Identities = 752/1024 (73%), Gaps = 2/1024 (0%)
Strand=Plus/Plus
Query 163881 GGGTGGTTCGATGTCCTGGACGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGG 163940
|| ||||| || | | |||||||||||||| || ||||| || || || || ||||||
Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048
Query 163941 TCTGGATTACTTCTTTTTCCCA-CTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGTAC 163999
|| ||| | || || |||||| ||| || ||||| ||||||| ||| ||||||| ||
Sbjct 2049 TCAGGAAT-TTTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107
Query 164000 AACGTTTGTTACCAGTTGGTACACCCACGGTCTCGCGTCTAGTTACCTTGAGGGTGCTAA 164059
||| || || || |||||||| |||||| | || | ||||||||||| |||
Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167
Query 164060 TTTCCTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 164119
||||||||| |||| || ||||| || || | ||||| ||| || |||||||| ||
Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227
Query 164120 TTGGGGTCCTGAGTCTCAGGGGGACTTCATTAGGTGGTGCCAACTTGGGGGACTCTGGGC 164179
|||||| || || | || || || |||| | ||||| || ||||| ||| | ||| |
Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287
Query 164180 TTTTGTGGCGTTCCACGGATCTTTCGCTCTGATCGGTTTCATGCTTCGGCAGTTTGAAAT 164239
|| || || | ||||| | |||| | ||||| || ||||| || || ||||||||
Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347
Query 164240 TGCACGTCTTGTAGGTATCCGTCCGTACAATGCTATTGCGTTCTCTGGTCCGATTGCTGT 164299
||||||| ||| || ||||||||||| || ||||| ||||| | || || |||||
Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407
Query 164300 CTTTGTCAGCGTTTTCCTTATGTACCCTCTCGGGCAATCTAGTTGGTTCTTTGCCCCCTC 164359
||||| || |||||||| ||||| || || ||||| | ||||||||||| || ||
Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467
Query 164360 GTTTGGGGTCGCGGCGATCTTCAGATTCCTCTTGTTCCTCCAAGGTTTCCATAACTGGAC 164419
||||| || |||| || ||| | ||| | | ||| ||||||| ||||| ||||||||
Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527
Query 164420 ACTCAACCCCTTCCATATGATGGGTGTTGCAGGCATCCTTGGTGGTGCTCTTCTCTGTGC 164479
||| ||||| ||||| |||||||| || || || | ||||| | || ||||| |||||
Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587
Query 164480 TATTCATGGTGCTACCGTAGAGAATACTTTGTTTGAAGATGGTGAACAATCAAATACTTT 164539
||||| || || || |||||||| || | || ||||||||||| ||||| |||||
Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647
Query 164540 CAAGGCATTCGAGCCTACTCAAGAGGAAGAGACTTACTCGATGGTCACTGCCAACCGCTT 164599
| ||||| | || ||||||| |||||||||||||| ||||| || || ||||| ||
Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707
Query 164600 CTGGTCTCAGATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCT 164659
|||||| |||||||| ||| | |||||| || ||||||||| | ||||||||||||||
Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767
Query 164660 CTTTGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTCAA 164719
|| || ||||| | || | |||| | ||||| | | || | ||||| ||
Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAA 2827
Query 164720 TCTTCGTGCTTATGATTTTGTGTCTCAGGAGATTAGAGCAGCAGAGGATCCTGAATTTGA 164779
|| ||||| || || || || || || ||||| | ||||| || |||||||| |||||
Sbjct 2828 CCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGA 2887
Query 164780 GACGTTCTATACGAAGAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGT 164839
|| ||||| || ||||| || || || || ||||| | ||||| |||||||| |
Sbjct 2888 AACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCA 2947
Query 164840 AGACCAGCCACACGAATCGTTTGTATTTCCAGAGGAAGTTCTTCCGAGAGGTAACGCACT 164899
||| ||||| || ||| ||||||| || ||||| || ||||| | || ||||| ||
Sbjct 2948 AGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 3007
Query 164900 CTAA 164903
|||
Sbjct 3008 TTAA 3011
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 559327867159600
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