Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq19 100 2e-16 >seq19 Length=40506 Score = 100 bits (110), Expect = 2e-16 Identities = 195/283 (69%), Gaps = 5/283 (2%) Strand=Plus/Minus Query 61055 GTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAG 61114 |||| || ||||| || ||| | | | || | ||||| ||||||||| | || || | Sbjct 30485 GTTTTGT-TTGTTTCCAATCAAAGAACAAGAGGTGTGGCGGATGTACAAACAAGCCGAGG 30427 Query 61115 CTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGG--AGCG 61172 |||| || |||| | ||||||| ||||||||||| | ||| ||||||| | | Sbjct 30426 CTTCGTTTTGGAGCGCGGAGGAGATCGATTTGTCCTACGACTACCGCGACTGGGTCAAC- 30368 Query 61173 TTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGA 61232 || | ||| ||||| || ||||| || |||||||||||||| ||||| || || Sbjct 30367 TTAACCGAAAAC-GAACAGCACTTCATCTCGCACGTGTTGGCGTTCTTCGCCGCGTCCGA 30309 Query 61233 CGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGC 61292 ||||||||| ||||||||| | || ||| | | || || || || | || || Sbjct 30308 CGGTATCGTGCTTGAGAATTTGGGGTTGCGGTTCCTGAAAGACGTACAGATGCCCGAAGC 30249 Query 61293 GCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCAC 61335 | | ||||||| |||||| | || || || || ||||| Sbjct 30248 GAGGGCGTTCTACGCGTTCCAGCTCGCGATCGAAAACATCCAC 30206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397562820310160