Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq63 86.0 3e-11 seq48 86.0 3e-11 seq114 84.2 9e-11 seq26 84.2 9e-11 >seq63 Length=15828 Score = 86.0 bits (94), Expect = 3e-11 Identities = 139/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 630181 TGCGTCTGCGCCTC-GCGCGGCTTCCTCAAGGTCCTCAAGGAGTTGCACGCGAGACAG-T 630238 ||||| |||| | | | |||| |||| |||| || || ||||||||||| || | | Sbjct 9201 TGCGTTTGCGGCGCAGGGCGGTCACCTCGAGGTGCTGCAGTGGTTGCACGCGA-ACGGCT 9143 Query 630239 GCCACTGGGACGAGTGGACATGCGCTGCCGCCGCGCGAGGAGGACACCTCGGCGTGCTGC 630298 ||| ||||||| |||||| ||||| ||| ||| || || || || | ||||||| Sbjct 9142 GCCCGTGGGACGGGTGGACGTGCGCGAGCGCAGCGGAGGGCGGGCATCTGGAGGTGCTGC 9083 Query 630299 GATGGCTCAGGGCGAACGGCTGTCCGTGGGACGACGAGACCATCCACAAGGCGGCCAAGG 630358 ||| | | ||||||||||| ||||||||||| ||| | || | ||||| ||| Sbjct 9082 AGTGGTTGCGCGCGAACGGCTGCCCGTGGGACGAGTGGACGTGCTACTACGCGGCGAAGA 9023 Query 630359 GAGGCCACCT-GAAG 630372 | || || || |||| Sbjct 9022 GCGGGCATCTCGAAG 9008 >seq48 Length=61504 Score = 86.0 bits (94), Expect = 3e-11 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 630204 CCTCAAGGTCCTCAAGGAGTTGCACGCGAGACAG-TGCCACTGGGACGAGTGGACATGCG 630262 |||| |||| || |||| ||||||||||| || | ||||| ||||||||| |||| |||| Sbjct 56878 CCTCGAGGTGCTGAAGGTGTTGCACGCGA-ACGGCTGCCAGTGGGACGAGGGGACGTGCG 56820 Query 630263 CTGCCGCCGCGCGAGGAGGACACCTCGGCGTGCTGCGATGGCTCAGGGCGAACGGCTGTC 630322 | | || ||| || ||||||| | ||||| ||| | | |||||||| || | Sbjct 56819 CGGGGGCGGCGATGTTCGGGCACCTCGAGGAGCTGCAGTGGTTGCGCGCGAACGGATGCC 56760 Query 630323 CGTGGGACGACGAGAC 630338 ||||| |||| ||||| Sbjct 56759 CGTGGAACGAGGAGAC 56744 >seq114 Length=33522 Score = 84.2 bits (92), Expect = 9e-11 Identities = 124/173 (72%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 630204 CCTCAAGGTCCTCAAGGAGTTGCACGCGAGACAG-TGCCACTGGGACGAGTGGACATGCG 630262 |||| |||| || || | || ||||| || | |||| ||| ||||| ||| |||| Sbjct 247 CCTCGAGGTGCTACAGTGGGCGCGCGCGA-ACGGCTGCCTGTGGAGCGAGTTGACGTGCG 305 Query 630263 CTGCCGCCGCGCGAGGAGGACACCTCGGCGTGCTGCGATGGCTCAGGGCGAACGGCTGTC 630322 | || || ||| |||||||||| ||||||| ||| | | ||||||||||| | Sbjct 306 CCTGTGCGGCAATAGGCGGACACCTCGAGGTGCTGCAGTGGTTGCGCGCGAACGGCTGCC 365 Query 630323 CGTGGGACGACGAGACCATCCACAAGGCGGCCAAGGGAGGCCACCTGAAGGTC 630375 ||||||||| ||||| | ||| |||||| |||| || ||||| ||||| Sbjct 366 CGTGGGACGCAGAGACGTGCGACAGGGCGGCGGAGGGCGGGCACCTCGAGGTC 418 >seq26 Length=40999 Score = 84.2 bits (92), Expect = 9e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 630224 TGCACGCGAGACAGTGCCACTGGGACGAGTGGACATGCGCTGCCGCCGCGCGAGGAGGAC 630283 ||| ||||| ||||| ||||||||| ||| ||||| | || ||| || || | Sbjct 250 TGCGCGCGAATGGGTGCCCGTGGGACGAGATGACGTGCGCGGGGGCGGCGAAGGGCGGGC 309 Query 630284 ACCTCGGCGTGCTGCGATGGCTCAGGGCGAACGGCTGTCCGTGGGACGACGAGACCATCC 630343 |||||| ||||||| ||| | | | |||||||| ||||||||||| ||||| || Sbjct 310 ACCTCGAGGTGCTGCAGTGGGTGCGCGATAACGGCTGCCCGTGGGACGAGGAGACGTGCC 369 Query 630344 ACAAGGCGGCCAAGGGAGGCCACCTGAAGGT 630374 | ||||||| ||| || ||||| ||||| Sbjct 370 ATGAGGCGGCGGGGGGCGGGCACCTCAAGGT 400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084709949806062