Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2187 289 4e-76 >seq2187 Length=11887 Score = 289 bits (320), Expect = 4e-76 Identities = 203/228 (89%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || ||| |||| ||||||| |||| ||||||| ||| | Sbjct 2477 GTACAAAGGGCAGGGACGTAATCGGCGCCAGCT-GATGACTGGCGCCTACTAGGCATT-C 2420 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||| || ||||||||| ||||||||||||||||| | | |||||||||||| Sbjct 2419 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCAGTTTCAAAGATTA 2360 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| ||||| |||| ||||| |||| || ||||||| | |||||||||||||||||||| Sbjct 2359 CCCAGACCTCTCGGTCAAGG--ATAGGCTTGTTGAATGCGTCAGTGTAGCGCGCGTGCGG 2302 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2301 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCATACTTCC 2254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751951044800