Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2187 197 3e-48 >seq2187 Length=11887 Score = 197 bits (218), Expect = 3e-48 Identities = 203/268 (76%), Gaps = 28/268 (10%) Strand=Plus/Plus Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGAA 134 |||||||| |||||||||||||||||||| |||| |||| |||||| ||||||||||| Sbjct 1158 TACTTTGAGTAAATTAGAGTGTTCAAAGCAAGCCTACGCTCTGAATACTTTAGCATGGAA 1217 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTC---------------------- 172 || ||||||| | | |||| | |||||| | Sbjct 1218 TATCGCGATAGGACT--CTGGCCTATCTCGTTGGTCTGNNNNNNNNNNNNNNNNNNNNNC 1275 Query 173 --TAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGA 230 |||||||| ||||||||||| ||||| ||||||||| | ||||| ||||||||| Sbjct 1276 TGTAGGACCGGAGTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATTGTCAGA 1335 Query 231 GGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTT 290 |||||||||||||||||||| ||||| ||||||||||||||| || |||||||||||| Sbjct 1336 GGTGAAATTCTTGGATTTATGAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTT 1395 Query 291 TCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||| ||||||||||| |||| Sbjct 1396 TCATTAATCA-AGAACGAAAGTTGGGGG 1422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915138498560