Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq6720 96.9 4e-18 >seq6720 Length=135362 Score = 96.9 bits (106), Expect = 4e-18 Identities = 125/167 (75%), Gaps = 8/167 (5%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || ||||||||| || ||| ||| | | | |||| Sbjct 42179 AAACCGACACAGGTAGGTAGGTAGAGAATACTAAGGGGCGCGAGAGAA-CTCTCTCTAAG 42237 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAA-ATGGGAG 142 ||||| ||||||||| ||| |||||||||| | || ||| ||| | || || || Sbjct 42238 GAACTCGGCAAACTGGCCCCGTAACTTCGGAAGAAGGGGCGCCTG---ATAACATC--AG 42292 Query 143 GGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||||| || ||| |||||| |||||||| |||||||||||| || Sbjct 42293 GTCGCAGTGACCAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCT 42339 Score = 96.9 bits (106), Expect = 4e-18 Identities = 125/167 (75%), Gaps = 8/167 (5%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || ||||||||| || ||| ||| | | | |||| Sbjct 103469 AAACCGACACAGGTAGGTAGGTAGAGAATACTAAGGGGCGCGAGAGAA-CTCTCTCTAAG 103411 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAA-ATGGGAG 142 ||||| ||||||||| ||| |||||||||| | || ||| ||| | || || || Sbjct 103410 GAACTCGGCAAACTGGCCCCGTAACTTCGGAAGAAGGGGCGCCTG---ATAACATC--AG 103356 Query 143 GGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||||| || ||| |||||| |||||||| |||||||||||| || Sbjct 103355 GTCGCAGTGACCAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCT 103309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531165418880