Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq6720 322 1e-85 >seq6720 Length=135362 Score = 322 bits (356), Expect = 1e-85 Identities = 292/366 (80%), Gaps = 9/366 (2%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | | | |||||||||||||| | |||||||| ||||| |||||| Sbjct 42586 GCATCTTCACGGACAAGTCTATTTCACCGAGTCTCTCTCTGAGACAGCGCCCAGATCGTT 42527 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||||||||||| ||||| ||||||| |||||| |||||||||||||||||||| || | Sbjct 42526 ACGCCTTTCGTGCAGGTCGAAACTTACTCGACAATGAATTTCGCTACCTTAGGACTGTCA 42467 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT-- 184 ||||||| ||||||||| || ||||||| || | ||||| ||| | |||| | Sbjct 42466 TAGTTACAGCCGCCGTTCACCGGGGCTTCGGTCGTCAGCTTCTCTTG-TAAAACAAAATA 42408 Query 185 -CC-----CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 || |||| ||||||| |||| |||||||||||||| || ||| || ||||| ||| Sbjct 42407 ACCAACTTCCTTCACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATATATTGTCTTACGA 42348 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298 ||| || || ||||||||||||||||||||||||| ||||||| || ||||| |||| Sbjct 42347 CTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCTGGGCCTGGTCACTGCGACCTGAT 42288 Query 299 ATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATA 358 | ||||| |||||||| || ||||||||||| || |||||||||||||||| | | Sbjct 42287 GTTATCAGGCGCCCCTTCTTCCGAAGTTACGGGGCCAGTTTGCCGAGTTCCTTAGAGAGA 42228 Query 359 GTTCTC 364 |||||| Sbjct 42227 GTTCTC 42222 Score = 322 bits (356), Expect = 1e-85 Identities = 292/366 (80%), Gaps = 9/366 (2%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | | | |||||||||||||| | |||||||| ||||| |||||| Sbjct 103062 GCATCTTCACGGACAAGTCTATTTCACCGAGTCTCTCTCTGAGACAGCGCCCAGATCGTT 103121 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||||||||||| ||||| ||||||| |||||| |||||||||||||||||||| || | Sbjct 103122 ACGCCTTTCGTGCAGGTCGAAACTTACTCGACAATGAATTTCGCTACCTTAGGACTGTCA 103181 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT-- 184 ||||||| ||||||||| || ||||||| || | ||||| ||| | |||| | Sbjct 103182 TAGTTACAGCCGCCGTTCACCGGGGCTTCGGTCGTCAGCTTCTCTTG-TAAAACAAAATA 103240 Query 185 -CC-----CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 || |||| ||||||| |||| |||||||||||||| || ||| || ||||| ||| Sbjct 103241 ACCAACTTCCTTCACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATATATTGTCTTACGA 103300 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298 ||| || || ||||||||||||||||||||||||| ||||||| || ||||| |||| Sbjct 103301 CTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCTGGGCCTGGTCACTGCGACCTGAT 103360 Query 299 ATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATA 358 | ||||| |||||||| || ||||||||||| || |||||||||||||||| | | Sbjct 103361 GTTATCAGGCGCCCCTTCTTCCGAAGTTACGGGGCCAGTTTGCCGAGTTCCTTAGAGAGA 103420 Query 359 GTTCTC 364 |||||| Sbjct 103421 GTTCTC 103426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062328606720