Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2187 291 1e-76 >seq2187 Length=11887 Score = 291 bits (322), Expect = 1e-76 Identities = 213/246 (87%), Gaps = 1/246 (0%) Strand=Plus/Minus Query 14 CGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2323 CGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 2264 Query 74 TCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGT 133 ||| |||||||||| | | ||||||||||||||||||| | |||| | | | | Sbjct 2263 TCATACTTCCATTGATTAAACATCAATAGTCCCTCTAAGAAGTCGGCCATCCGCAAGAAG 2204 Query 134 CGATGGGG-CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 192 ||| | | |||||||| | | | ||||||||||||||| |||||| |||| ||||| | Sbjct 2203 CGAACGTGACTATTTAGTAAGCTGAGGTCTCGTTCGTTACCGGAATCAACCTGACAAGGC 2144 Query 193 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252 | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2143 AACCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAA 2084 Query 253 TCTGTC 258 |||||| Sbjct 2083 TCTGTC 2078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796748128320