Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq6720 93.3 3e-17 >seq6720 Length=135362 Score = 93.3 bits (102), Expect = 3e-17 Identities = 105/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||| ||||| || || |||||||||| | || | Sbjct 42990 TAACTTTTATCCGTTGAGCGACGGCCTTTCCACACAGCACCGTCGGATCACTAAGGCCGG 42931 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-- 118 ||||||| ||| | | |||| | |||| || |||||| | |||||||| || |||| Sbjct 42930 CTTTCGCCCCTGTTTGACTTGTAGGTCTCACAGTCAAGCTCCCTTTTGCCTTTACACTCA 42871 Query 119 ATCACTACGATTTCCGACC 137 || || |||||||| || Sbjct 42870 ATGTCT--GATTTCCGTCC 42854 Score = 93.3 bits (102), Expect = 3e-17 Identities = 105/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||| ||||| || || |||||||||| | || | Sbjct 102658 TAACTTTTATCCGTTGAGCGACGGCCTTTCCACACAGCACCGTCGGATCACTAAGGCCGG 102717 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-- 118 ||||||| ||| | | |||| | |||| || |||||| | |||||||| || |||| Sbjct 102718 CTTTCGCCCCTGTTTGACTTGTAGGTCTCACAGTCAAGCTCCCTTTTGCCTTTACACTCA 102777 Query 119 ATCACTACGATTTCCGACC 137 || || |||||||| || Sbjct 102778 ATGTCT--GATTTCCGTCC 102794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351977824000