Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2187 86.0 6e-15 >seq2187 Length=11887 Score = 86.0 bits (94), Expect = 6e-15 Identities = 138/201 (69%), Gaps = 28/201 (14%) Strand=Plus/Plus Query 15 TACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAA 73 |||||||| ||||||||| |||||||||| |||| |||| |||||| ||| ||||||| Sbjct 1158 TACTTTGAGTAAATTAGAGTGTTCAAAGCAAGCCTACGCTCTGAATACTTTAGCATGGAA 1217 Query 74 TAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTC---------------------- 111 || ||||||| | | |||| | || ||| | Sbjct 1218 TATCGCGATAGGACT--CTGGCCTATCTCGTTGGTCTGNNNNNNNNNNNNNNNNNNNNNC 1275 Query 112 --TAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAA 169 |||||||| |||||||| || | ||| ||||||||| | ||||| ||||||| Sbjct 1276 TGTAGGACCGGA-GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATTGTCAG 1334 Query 170 AGGTGAAATTCTTGGATTTAT 190 ||||||||||||||||||||| Sbjct 1335 AGGTGAAATTCTTGGATTTAT 1355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511966668800