Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2187 313 5e-83 >seq2187 Length=11887 Score = 313 bits (346), Expect = 5e-83 Identities = 260/312 (83%), Gaps = 7/312 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTT-TGGCGGGTCGCCGGCTTCTTA 78 || |||||||| | | | |||||||| || | ||||| | |||| | |||| ||||||| Sbjct 2169 GAACGAGACCTCAGCTTACTAAATAGTCACGTTCGCTTCTTGCGGATGGCCGACTTCTTA 2228 Query 79 GAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 |||||||||| | | | || | |||||||| ||||||||||||||||||||||||||| Sbjct 2229 GAGGGACTATTGATGTTTAATCA-ATGGAAGTATGAGGCAATAACAGGTCTGTGATGCCC 2287 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 ||||||||||||||||||||||||||||||||||| | |||| || ||| |||| Sbjct 2288 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACGCATTCAACAAGCCTATC--CTTGA 2345 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||| |||||||||||||||| | ||||| |||||| |||||||||| |||||||||| Sbjct 2346 CCGAGAGGTCTGGGTAATCTT-TGAAACTGCGTCGTGATGGGGATAGATTATTGCAATTA 2404 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 || ||||||||||||||||||||||| |||| ||||||||| ||| |||||||||| Sbjct 2405 TTAGTCTTCAACGAGGAATGCCTAGTAGGCGCCAGTCATCAGCTGGCGCCGATTACGTCC 2464 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 2465 CTGCCCTTTGTA 2476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947136348160