Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2187 614 2e-173 >seq2187 Length=11887 Score = 614 bits (680), Expect = 2e-173 Identities = 445/508 (88%), Gaps = 9/508 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| || |||| |||| |||||||||||||||||| Sbjct 533 GTACTCATTCCAATTACCAGACATTGAAT-GCCCGGTATTGTTATTTATTGTCACTACCT 475 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 474 CCCCGTATCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 415 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||| | |||| ||||||| ||||||||| Sbjct 414 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATCCTCCGTCACCCGTTACCACCATGGTA 355 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 354 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAAACATCGCCAGCA 295 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC---GTT 297 |||||| ||||||||||| ||||||| ||| ||||| || | | | || || || Sbjct 294 CAAGGCTATGCGATTCGTGAAGTTATCATGGTTCACCGCGG-GTCGGGCAGAGCCCGGTC 236 Query 298 GGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCT 356 || ||||||||||||||||| ||||||| |||||| ||| ||| ||| |||||||| Sbjct 235 GGCCTTTTATCTAATAAATACGTCCCTTCCAGAAGTC-GGGATTTGCGCACGTATTAGCC 177 Query 357 CTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTA 416 |||||||||| |||||||||| ||||| |||||| ||||||||||| |||||||||||| Sbjct 176 CTAGAATTACTACGGTTATCCGTGTAG--AGGTACCATCAAATAAACTATAACTGATTTA 119 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| Sbjct 118 ATGAGCCATTCGCAGTTTCACAGTATAAGCAGTTTATACTTAGACATGCATGGCTTAATC 59 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 58 TTTGAGACAAGCATATGACTACTGGCAG 31 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510298501120