Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monoraphidium_20neglectum_20[refseq_20GCF_5F000611645.1_202015-02- 26] 6,720 sequences; 69,711,829 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq6519 89.7 2e-12 >seq6519 Length=2166 Score = 89.7 bits (98), Expect = 2e-12 Identities = 127/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGG-CGTCTCGCCGGCCGC 449064 ||||||||||| ||| || | || ||||||||||||| ||||| | || || | | Sbjct 1916 GTCATGCGCGAGGGGAAGCCGTGGGGGTTCATGATGAGATCGGGGCAGATCCCCCTCTCC 1975 Query 449065 GTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCG 449124 | ||| || | ||||| | | || ||||| || |||||||||||||||||||| Sbjct 1976 GA-GAATGGGAAGTCCTGCTGCTGGATCACCACCCCCACCACGCCCTTCTGGCCGTGGCG 2034 Query 449125 GCTGCAGAACTTGTCCCCCTGCTCGGGCTTGCGTGTGAAGCGCAGCACGATCTTGA 449180 |||||||||||||| ||||||| ||| ||| ||| | ||| | ||||| Sbjct 2035 CGACGAGAACTTGTCCCCCAGCTCGGGGCGGCGCGTGTGGCGGATCACCACCTTGA 2090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084555326002560