Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 197 6e-48 >seq12 Length=542657 Score = 197 bits (218), Expect = 6e-48 Identities = 222/297 (75%), Gaps = 19/297 (6%) Strand=Plus/Minus Query 387 TGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATG 446 ||||| || |||| | || ||||||| | |||||||||||||||||||||||| | || Sbjct 111032 TGGCGGAAAGGTTTGCATCGACCCGTCTAGAAACACGGACCAAGGAGTCTAACATGTGTG 110973 Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506 ||||| |||||| ||||||| | | | |||| | | ||| || Sbjct 110972 CGAGTCGGTGGGTGGCAAACCCACGAGGC----GCAAGTAACCT--------AAC---TG 110928 Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566 | || ||||||| | | |||| | | || | ||||||| |||||| || Sbjct 110927 AA----CAAAATCGACCAACCATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATGCATGC 110872 Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 110871 TGGGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCAGAGGAAACTCTGGTG 110812 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||| |||| | ||| ||||||||||| ||||| | || ||||||||||||| Sbjct 110811 GAGGCTCGTAGCGATACTGACGTGCAAATCGTTCGTCGGACTTAGGTATAGGGGCGA 110755 Score = 181 bits (200), Expect = 4e-43 Identities = 138/163 (85%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| |||| || |||||||| | ||||| ||||||| Sbjct 111293 GAGTCGGGTTGTTTGGGAATGCAGCCCTAAGCAGGTGGTAAATTCCATCTAAGGCTAAAT 111234 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || ||| |||||||||||||| ||||||| | || ||||||||||||| ||||| || Sbjct 111233 ATAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGACCTTTGAAA 111174 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| || |||||||||||| |||||||| || Sbjct 111173 AGAGAGTTAAAAAGTACCTGAAATTGTTGAGGGGGAAGCGATT 111131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999571000