Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq12 320 3e-85 >seq12 Length=542657 Score = 320 bits (354), Expect = 3e-85 Identities = 259/310 (84%), Gaps = 4/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||| | |||||||||||| | ||| | ||| | | |||||||| Sbjct 112620 GAACGAGACCTCAGCCTGCTAAATAGTTGGACCCTACTCTTAGGGCCACAA-CTTCTTAG 112562 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||||| || | ||| ||||||||||||||||||||||||||||||||||||| Sbjct 112561 AGGGACTATGTGCGTGTAGCACGTGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 112502 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| | ||||||| | || ||||||||| Sbjct 112501 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGAATTCAACGAGCTTATAACCTTGGCC 112442 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||||||||||||||| ||| | |||||| |||||||||| |||||||||||| Sbjct 112441 GAAAGGTCTGGGTAATCT--CCAAAATTCGTCGTGATGGGGATAGATTATTGCAATTATT 112384 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 112383 AATCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 112324 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 112323 GCCCTTTGTA 112314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199810560