Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq12 601 1e-169 >seq12 Length=542657 Score = 601 bits (666), Expect = 1e-169 Identities = 439/504 (87%), Gaps = 13/504 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||||||||| |||| ||| ||||| |||| |||||||||||||||||| Sbjct 113411 GTTCTCATTCCAATTACCAGACTTGAAAAAGCCCGGTATTGTTATTTATTGTCACTACCT 113470 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 113471 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 113530 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||| Sbjct 113531 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCACCATGGTA 113590 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 113591 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGGAACATCGCCGGCG 113650 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||| |||| ||| |||||||||||| |||| | | ||| | || || Sbjct 113651 CAAGGCCA-ACGATCCGTAAAGTTATTATGATTCAC-------CGCAGAACGAGGTCGG- 113701 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 | |||||||||||||||| ||||||||||||| ||| ||| ||| ||||||||||||| Sbjct 113702 TCTTTATCTAATAAATACGTCCCTTCCGAAGTC-GGGATTTACGCACGTATTAGCTCTAG 113760 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||| |||||||||| ||||||| || | |||| |||| || |||||||||||| Sbjct 113761 AATTACTACGGTTATCCGAGTAGTAA-ACACCACCAAAGAAACTATTGCTGATTTAATGA 113819 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct 113820 GCCATTCGCAGTTTCACAGTAT--AACGCTTATACTTAGACATGCATGGCTTAATCTTTG 113877 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 113878 AGACAAGCATATGACTACTGGCAG 113901 Score = 246 bits (272), Expect = 9e-63 Identities = 178/202 (88%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 303 TTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAA 362 |||||||||||||||| |||||||||||||||| ||| ||| ||||||||||||||| Sbjct 132303 TTTATCTAATAAATACGTCCCTTCCGAAGTCGGGATTTAC-GCACGTATTAGCTCTAGAA 132361 Query 363 TTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGC 422 |||| |||||||||| ||||||| || | |||| |||| || |||||||||||||| Sbjct 132362 TTACTACGGTTATCCGAGTAGTAAAC-ACCACCAAAGAAACTATTGCTGATTTAATGAGC 132420 Query 423 CATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAG 482 ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 132421 CATTCGCAGTTTCACAGTATAAC--GCTTATACTTAGACATGCATGGCTTAATCTTTGAG 132478 Query 483 ACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||| Sbjct 132479 ACAAGCATATGACTACTGGCAG 132500 Score = 109 bits (120), Expect = 2e-21 Identities = 69/74 (93%), Gaps = 2/74 (3%) Strand=Plus/Plus Query 431 GTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCAT 490 ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 123747 GTTTCACAGTATAAC--GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCAT 123804 Query 491 ATGACTACTGGCAG 504 |||||||||||||| Sbjct 123805 ATGACTACTGGCAG 123818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399697920