Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02] 20 sequences; 12,916,858 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1 255 5e-63 >seq1 Length=1096037 Score = 255 bits (282), Expect = 5e-63 Identities = 430/615 (70%), Gaps = 8/615 (1%) Strand=Plus/Minus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073 || || | |||||| || || | || || || || ||||| ||||| || |||||| Sbjct 14728 GAAGCCAAGTTGCACACGGCGGTTTCATCCGGGCTCGTGTACTCAACAATCTCTGTGCAC 14669 Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133 | || | | || ||||| | || ||||| ||| |||||| ||||| |||||| Sbjct 14668 AAGTTGGAGGACTTGATCGTGCCGAGGTTTTGTTGGTTAGACTTGCGGTTGCACGCATCC 14609 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193 || | | |||||| || | |||||||||||||||||||| | |||||| |||||| Sbjct 14608 TTAAAGAGCATGTATGGGTTACCGGTCTCAACTTGGGACTCGAGGATGGCAAACCAAAGT 14549 Query 66194 GCGCGTGCCTTCACCGTA--CGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGT 66251 | ||||| | || | |||| | |||| | |||||| | ||| || || Sbjct 14548 TGTTGAGCCTTGATGGTCTTCTTACC--CTTACCCTCCGCTTCGTACTTTTCATACAGAG 14491 Query 66252 GTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCG 66311 |||||| |||||||| || |||| | || |||| || || ||||||| || Sbjct 14490 TTTCGAATTCCTCACCCCAGCAGTCAGACAATCCAGGGCACTCGTTCGGGCACATCAACG 14431 Query 66312 ACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGA 66371 ||| || || | | || || || |||||| | || |||| ||| |||||| Sbjct 14430 TCCATTCGCCGTTCGCCTCGACGCGCTTCATAAACAAGTCGTTCGTCCACAGGCCGTAGA 14371 Query 66372 AGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAA 66431 | |||||||| || || ||||| | ||||| || || |||||||| || | |||| Sbjct 14370 ACAGATCGCGCGCGCGCGCTTCCTCCTTACCGTGGTTCTTACGCAAGTCAAGCCAGTCAA 14311 Query 66432 AGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCAC 66491 ||||||| || ||||| || || |||||||||||||||| ||| | || || || |||| Sbjct 14310 AGATGTCTGCGTGCCACGGCTCGAGGTAGATGGCGAACGCTCCCTTGCGCTTACCACCAC 14251 Query 66492 CTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAG 66551 ||||||| ||||||||||| | |||||| ||||||| |||||| | || ||||| | Sbjct 14250 CTTGGTCCACGTAGCGAGCCGTGTCGTTGAACACACGCAGCATCGGAATGATGCCGTTCG 14191 Query 66552 ATTTGCCATTGGTGCCGTCG-ATGGGGGATCCTCGT-GCCCGTATATCGTGAACATTCAG 66609 | | || |||||||| ||| ||| || ||||| || || |||||||| | || Sbjct 14190 ACGTTCCGTTGGTGCC-TCGAATGTAAGA-GCTCGTAGCTCGGATATCGTGGATGGACAA 14133 Query 66610 ACCAATACCACCGGC 66624 ||| ||||| ||||| Sbjct 14132 ACCGATACCTCCGGC 14118 Score = 111 bits (122), Expect = 1e-19 Identities = 326/496 (66%), Gaps = 21/496 (4%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||| ||| |||| |||||||| | | || ||||||||||||||| Sbjct 15715 TCGACAGTGAACTTGATGGCATCCGCAGCCGCGCGAGAGCGCAGGTAGTACATGCCGGTC 15656 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || ||||| ||| || || || |||| || | | || | ||||| ||| Sbjct 15655 TTCAGGCCCTTCTTCCACGCGTAAAAGTGCAAGGAGGTGAGCTTACCGCTGTTCGGATCG 15596 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCAT 65256 || |||| || || |||||| |||||| ||| |||| || | ||| || ||||| Sbjct 15595 CTCATGTGCACGTTGAAGGACTGAGACTGATCAATG-AACGCGCCTCTATCCGCGGCCAT 15537 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316 ||||| | | |||| | |||||||| || |||||||| | || | |||| Sbjct 15536 GTCAACAAGAACACGTTGCTTGATCTCCCACACCGTCTTGTA-----AATGTTCTTCAAG 15482 Query 65317 T-----GGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGC 65371 | ||||| ||| | ||| || || |||| || || | | ||| | | | Sbjct 15481 TTGTCCGGAATGTCC---AAGTCTTGCACGGAAC--CGTTGTTCGA-GATGAGCTCGTTC 15428 Query 65372 ATCGACTCTG---ACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATG 65428 || ||| | ||||| || | || | |||| | |||||| | || | | Sbjct 15427 TTCAGCTCCGGATCCCACAGGCCAAGCTCAGTGAGATCAGACAACAAGTGCTGGTTCACG 15368 Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 || ||||| ||||||| || || || | |||||||| |||||| || || ||| Sbjct 15367 ACGGTAAACTCACCGGACAACACGCGGCGAGCGTAGATGTTCGACGTGTACGGCTCGAAG 15308 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 | || ||||||| |||||||| | ||||| || || ||||| |||||||| | ||| Sbjct 15307 CACTCGTTGTTGCCAAGAATTTGAGACGTAGACGCGGTCGGCATCGGAGCGACGAGCAAA 15248 Query 65549 GAGTTTCGCAATCCGT 65564 ||||| || | |||| Sbjct 15247 GAGTTGCGAACGCCGT 15232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567903092800