Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ostreococcus_20tauri_20[genbank_20GCA_5F000214015.2_202014-10-02]
20 sequences; 12,916,858 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1 255 5e-63
>seq1
Length=1096037
Score = 255 bits (282), Expect = 5e-63
Identities = 430/615 (70%), Gaps = 8/615 (1%)
Strand=Plus/Minus
Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073
|| || | |||||| || || | || || || || ||||| ||||| || ||||||
Sbjct 14728 GAAGCCAAGTTGCACACGGCGGTTTCATCCGGGCTCGTGTACTCAACAATCTCTGTGCAC 14669
Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133
| || | | || ||||| | || ||||| ||| |||||| ||||| ||||||
Sbjct 14668 AAGTTGGAGGACTTGATCGTGCCGAGGTTTTGTTGGTTAGACTTGCGGTTGCACGCATCC 14609
Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193
|| | | |||||| || | |||||||||||||||||||| | |||||| ||||||
Sbjct 14608 TTAAAGAGCATGTATGGGTTACCGGTCTCAACTTGGGACTCGAGGATGGCAAACCAAAGT 14549
Query 66194 GCGCGTGCCTTCACCGTA--CGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGT 66251
| ||||| | || | |||| | |||| | |||||| | ||| || ||
Sbjct 14548 TGTTGAGCCTTGATGGTCTTCTTACC--CTTACCCTCCGCTTCGTACTTTTCATACAGAG 14491
Query 66252 GTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCG 66311
|||||| |||||||| || |||| | || |||| || || ||||||| ||
Sbjct 14490 TTTCGAATTCCTCACCCCAGCAGTCAGACAATCCAGGGCACTCGTTCGGGCACATCAACG 14431
Query 66312 ACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGA 66371
||| || || | | || || || |||||| | || |||| ||| ||||||
Sbjct 14430 TCCATTCGCCGTTCGCCTCGACGCGCTTCATAAACAAGTCGTTCGTCCACAGGCCGTAGA 14371
Query 66372 AGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAA 66431
| |||||||| || || ||||| | ||||| || || |||||||| || | ||||
Sbjct 14370 ACAGATCGCGCGCGCGCGCTTCCTCCTTACCGTGGTTCTTACGCAAGTCAAGCCAGTCAA 14311
Query 66432 AGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCAC 66491
||||||| || ||||| || || |||||||||||||||| ||| | || || || ||||
Sbjct 14310 AGATGTCTGCGTGCCACGGCTCGAGGTAGATGGCGAACGCTCCCTTGCGCTTACCACCAC 14251
Query 66492 CTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAG 66551
||||||| ||||||||||| | |||||| ||||||| |||||| | || ||||| |
Sbjct 14250 CTTGGTCCACGTAGCGAGCCGTGTCGTTGAACACACGCAGCATCGGAATGATGCCGTTCG 14191
Query 66552 ATTTGCCATTGGTGCCGTCG-ATGGGGGATCCTCGT-GCCCGTATATCGTGAACATTCAG 66609
| | || |||||||| ||| ||| || ||||| || || |||||||| | ||
Sbjct 14190 ACGTTCCGTTGGTGCC-TCGAATGTAAGA-GCTCGTAGCTCGGATATCGTGGATGGACAA 14133
Query 66610 ACCAATACCACCGGC 66624
||| ||||| |||||
Sbjct 14132 ACCGATACCTCCGGC 14118
Score = 111 bits (122), Expect = 1e-19
Identities = 326/496 (66%), Gaps = 21/496 (4%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| ||||||| ||| |||| |||||||| | | || |||||||||||||||
Sbjct 15715 TCGACAGTGAACTTGATGGCATCCGCAGCCGCGCGAGAGCGCAGGTAGTACATGCCGGTC 15656
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197
|| ||||| ||| || || || |||| || | | || | ||||| |||
Sbjct 15655 TTCAGGCCCTTCTTCCACGCGTAAAAGTGCAAGGAGGTGAGCTTACCGCTGTTCGGATCG 15596
Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCAT 65256
|| |||| || || |||||| |||||| ||| |||| || | ||| || |||||
Sbjct 15595 CTCATGTGCACGTTGAAGGACTGAGACTGATCAATG-AACGCGCCTCTATCCGCGGCCAT 15537
Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316
||||| | | |||| | |||||||| || |||||||| | || | ||||
Sbjct 15536 GTCAACAAGAACACGTTGCTTGATCTCCCACACCGTCTTGTA-----AATGTTCTTCAAG 15482
Query 65317 T-----GGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGC 65371
| ||||| ||| | ||| || || |||| || || | | ||| | | |
Sbjct 15481 TTGTCCGGAATGTCC---AAGTCTTGCACGGAAC--CGTTGTTCGA-GATGAGCTCGTTC 15428
Query 65372 ATCGACTCTG---ACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATG 65428
|| ||| | ||||| || | || | |||| | |||||| | || | |
Sbjct 15427 TTCAGCTCCGGATCCCACAGGCCAAGCTCAGTGAGATCAGACAACAAGTGCTGGTTCACG 15368
Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488
|| ||||| ||||||| || || || | |||||||| |||||| || || |||
Sbjct 15367 ACGGTAAACTCACCGGACAACACGCGGCGAGCGTAGATGTTCGACGTGTACGGCTCGAAG 15308
Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548
| || ||||||| |||||||| | ||||| || || ||||| |||||||| | |||
Sbjct 15307 CACTCGTTGTTGCCAAGAATTTGAGACGTAGACGCGGTCGGCATCGGAGCGACGAGCAAA 15248
Query 65549 GAGTTTCGCAATCCGT 65564
||||| || | ||||
Sbjct 15247 GAGTTGCGAACGCCGT 15232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567903092800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |