Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq816 250 5e-64 >seq816 Length=4168 Score = 250 bits (276), Expect = 5e-64 Identities = 223/276 (81%), Gaps = 4/276 (1%) Strand=Plus/Plus Query 44 CTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG 103 |||||||| | | | |||| | | || ||||||||| |||||||||||||||||| Sbjct 2017 CTTCACTGTCCGGGACTCGGAGTCGGCGCTGTTACTTTGAGTAAATTAGAGTGTTCAAAG 2076 Query 104 CAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTT 162 ||||||| |||| ||||||||||||||||||||| | ||||||| | | |||| Sbjct 2077 CAGGCCTACGCTCTGAATACATTAGCATGGAATAACACGATAGGACT--CTGGCCTATCC 2134 Query 163 TGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAA 222 ||||||| | |||||||| ||||||||||| ||||| ||||||||| | ||||| Sbjct 2135 TGTTGGTCTGTAGGACCGGAGTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCG 2194 Query 223 TTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAA 282 ||||||||||||||||||||||||| ||||| ||||||||||||||| || |||| Sbjct 2195 ATGTCAGAGGTGAAATTCTTGGATTTTCGAAAGACGAACTACTGCGAAAGCATTTGCCAA 2254 Query 283 GGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||||| ||||||||||| |||| Sbjct 2255 GGATGTTTTCATTAATCA-AGAACGAAAGTTGGGGG 2289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915166586048