Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq3198 116 1e-23 >seq3198 Length=6291 Score = 116 bits (128), Expect = 1e-23 Identities = 231/345 (67%), Gaps = 19/345 (6%) Strand=Plus/Minus Query 12 AATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAA 71 || ||| |||||||| |||||||||||||||||||||||| || |||||||||| Sbjct 5984 AAAAAGTCCCGGCTAATCTCGTGCCAGCAGCCGCGGTAATACGAGAGGGGCAAGCGTTAT 5925 Query 72 TCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGG------------------TTGTGTAA 113 ||||||| | ||||||||||| | || |||| | || | || Sbjct 5924 TCGGAATGATTGGGCGTAAAGAGCACGTAGGCTGTTTATATAATCTATTTTTTTATTAAA 5865 Query 114 GACAGGTGTGAAATCCCCGGGCTTAACC-TGGGAATTGCATTTGTGACTGCACGACTAGA 172 | || | || | |||||||||| || ||| | | | || | ||| || Sbjct 5864 TAAAGAGGACTAAGTTCAGGGCTTAACCTTGAGAAGTCTAAATAAGATTAATAAACTTGA 5805 Query 173 GTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGA 232 || || | ||| |||||||||| | |||| || |||| || || | |||||| Sbjct 5804 GTAAGTAAAAGGAAAGTGGAATTCCTGGAGTAGAGGTAAAATTTGTTAATCTCAGGAGGA 5745 Query 233 ACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGG 292 || || | ||||||||| || | | ||||||| | | | |||||||||||| Sbjct 5744 ACGCCGAAAGCGAAGGCAATTTTCTAGTACTTTACTGACGTTGAGGTGCGAAAGCGTGGG 5685 Query 293 GAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 || |||| ||||||||||||| ||||||||||| | |||||| Sbjct 5684 GATCAAAAGGGATTAGATACCCCTGTAGTCCACGCTGTCAACGAT 5640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289552916704