Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq817 385 8e-105 seq1168 111 3e-22 >seq817 Length=3580 Score = 385 bits (426), Expect = 8e-105 Identities = 261/293 (89%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||| ||| | ||||| || | || || || |||||||||||||||||||||||||| Sbjct 652 TACTGAGCCGGATTACTATGGCGGGATCGCACAACAGTAGGGTAAAACTAACCTGTCTCA 593 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct 592 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACACTTGGTGA 533 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 532 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 473 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | Sbjct 472 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAATTTTTCTGACACCTCTAGCTT 413 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||||| ||| | ||||||||||||||||||| |||||| |||||||||| Sbjct 412 CAAATCCCGAAAGGCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 360 >seq1168 Length=46813 Score = 111 bits (122), Expect = 3e-22 Identities = 73/81 (90%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 21 GGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTC 80 |||||| | || |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct 41200 GGGGCGTGGCACAACAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCAC 41141 Query 81 ACGTTCCCTATTAGTGGGTGA 101 |||||||||||| |||||||| Sbjct 41140 ACGTTCCCTATTGGTGGGTGA 41120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854368805856