Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq3198 215 8e-54 >seq3198 Length=6291 Score = 215 bits (238), Expect = 8e-54 Identities = 206/261 (79%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 16 GCTT-AGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGC 74 |||| |||||| |||||| || | | |||||||||||||| |||||| |||| ||||| Sbjct 3669 GCTTGAGATGCTTTCAGCAGTTCTACGTTCCAAACTTAGCTACCCAGCGATGCCGTTGGC 3610 Query 75 AGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCC 134 | ||||||||| ||||||||||||||| ||||||||||||||||| |||| || | Sbjct 3609 ACGACAACTGGTACACCAGAGGTTTGTCATTCCCGGTCCTCTCGTACAGAGGAATGCCAC 3550 Query 135 TCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACC 194 |||| | ||| || ||| | |||||| ||| ||||||| |||||| || |||| Sbjct 3549 TCTC-AGTTTTTAACACCCGAAAAAGATAGGATCCGTACTGTCTTACGACGTACTAAACC 3491 Query 195 CAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCA 254 || ||| ||| || |||| || ||||||||||| ||||||| | |||| ||||||| | | Sbjct 3490 CAACTCACGTACCACTTTCATCGGCGAACAGCCGAACCCTTCGAACCTTCTTCAGCTCGA 3431 Query 255 GGATGAGACGAGCCGACATCG 275 ||||| || ||| |||||||| Sbjct 3430 GGATGTGATGAGTCGACATCG 3410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780772383836