Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq3198 109 2e-21 >seq3198 Length=6291 Score = 109 bits (120), Expect = 2e-21 Identities = 106/135 (79%), Gaps = 1/135 (1%) Strand=Plus/Minus Query 235 GCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTG 294 |||||| ||| |||||||||||| ||| || | | || | |||||||||| ||||| ||| Sbjct 6291 GCCACACTGGGACTGAGACACGGCCCAGACGCTTTCGAGCGGCAGCAGTGAGGAATTTTG 6232 Query 295 CACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGC-CTTCGGGTCG 353 ||||||||| |||||||||| |||| | |||||||| || |||| | || ||| | Sbjct 6231 GACAATGGGCGAAAGCCTGATCCAGCCATATCGCGTGAGTGAAGAAGACTGTTTTGGTTG 6172 Query 354 TAAAGCTCTGTCCTC 368 |||| |||| | ||| Sbjct 6171 TAAAACTCTTTACTC 6157 Score = 96.9 bits (106), Expect = 1e-17 Identities = 94/120 (78%), Gaps = 1/120 (1%) Strand=Plus/Minus Query 373 AAGATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTA 432 ||||| ||||| ||||| | ||| ||||||||| ||||||||||||||||||| Sbjct 6006 AAGATTATGACATAGTTTGAGAAAAAAGTCCCGGCTAATCTCGTGCCAGCAGCCGCGGTA 5947 Query 433 ATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492 ||||| ||||| |||||||| |||||| | | |||||||||| | |||||| |||| Sbjct 5946 ATACGAGAGGGGCAAGCGTTATTCGGAATGA-TTGGGCGTAAAGAGCACGTAGGCTGTTT 5888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497545322624