Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq3198 143 6e-32 >seq3198 Length=6291 Score = 143 bits (158), Expect = 6e-32 Identities = 244/354 (69%), Gaps = 21/354 (6%) Strand=Plus/Minus Query 4 TTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAG 63 ||||| | ||| ||||||||| |||||||||||||||||||||||| ||||| || Sbjct 5990 TTGAGAAAAAAGTCCCGGCTAATCTCGTGCCAGCAGCCGCGGTAATACGAGAGGGGCAAG 5931 Query 64 CGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC--------- 114 |||||| |||||| | ||||||||||| | |||||| |||| | | || Sbjct 5930 CGTTATTCGGAATGATTGGGCGTAAAGAGCACGTAGGCTGTTTATATAATCTATTTTTTT 5871 Query 115 ---------AGAGGTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGG 165 ||||| ||| | |||| |||| | || || || | | Sbjct 5870 ATTAAATAAAGAGGACTAAGTTCAGGGCTTAACCTTGAGAAGTCTAAATAAGATTAATAA 5811 Query 166 -CTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTA 224 || |||| | || ||||||||||||| | |||| ||| |||| || || | | Sbjct 5810 ACTTGAGTAAGTAAAAGGAAAGTGGAATTCCTGGAGTAGAGGTAAAATTTGTTAATCTCA 5751 Query 225 GGAGGAACACCAGTGGCGAAGGCGGCTTGCTGG-ACTGTAACTGACACTGAGGCTCGAAA 283 |||||||| || |||||||| || || | ||| || ||||| ||||| ||||| Sbjct 5750 GGAGGAACGCCGAAAGCGAAGGCAATTTTCTAGTACTTTA-CTGACGTTGAGGTGCGAAA 5692 Query 284 GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 ||||||||| |||| ||||||||||||| ||||||||||| || |||||||| Sbjct 5691 GCGTGGGGATCAAAAGGGATTAGATACCCCTGTAGTCCACGCTGTCAACGATGA 5638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203156071168