Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq3436 188 2e-45 seq3198 131 6e-28 >seq3436 Length=2517 Score = 188 bits (208), Expect = 2e-45 Identities = 354/509 (70%), Gaps = 16/509 (3%) Strand=Plus/Plus Query 33 TAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGG 92 |||||||||| || |||||||| ||||| ||||||||||| | |||||||| | || Sbjct 1503 TAGACCCGAACCCGGGTGATCTAACCATGACCAGGATGAAGCTTGGGTAACACCACGTGA 1562 Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 ||||||||||| || |||||||||||| | ||||||| ||||| ||| ||||||| | Sbjct 1563 AGGTCCGAACCGACCGATGTTGAAAAATCGGCGGATGAGTTGTGGTTAGCGGTGAAATAC 1622 Query 153 TAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAG--GTAGTGCCTCA--A 208 || | |||| ||| |||||||||||| |||||| || || | || | | | | Sbjct 1623 CAATCGAACTCGGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCGGTTTATGA 1682 Query 209 GTATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGG-GGTCATTGCGACTTACCAAAC 267 | | | | |||||| ||||||||| || ||| | | ||| ||||||| Sbjct 1683 GGCTGTCTA---GGGGTAAAGCACTGTTTCGGTGCGGGCTGCGAAAGCG--GTACCAAAT 1737 Query 268 CATTGCAAACTCCGAATGC-GCATCAG-TTTTACCGCGGGAGTGAGGGCATGGGTGCTAA 325 | | |||||||| |||| | || | | || | | |||||| |||| | ||| Sbjct 1738 CGTGGCAAACTCTGAATACTAGATATGCTATTCATGAGCCAGTGAGACGGTGGGGGATAA 1797 Query 326 GGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTA 385 | | | | | ||||| || | || || | ||||||||||||| ||||| | || Sbjct 1798 GCTTCATCGTCAAGAGGGAAACAGCCCAGATCACCAGCTAAGGCCCCAAAATGGTCGTTA 1857 Query 386 AGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCAT 445 ||| | || || || || |||| | ||| | |||| ||| |||| |||||||||| Sbjct 1858 AGT--GGCAAAGGAGGTGAGAATGCTGAAACAACCAGGAGGTTTGCTTAGAAGCAGCCA- 1914 Query 446 TCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGG 505 | |||||||||||||||| |||||||| || ||| || ||| || ||| || || Sbjct 1915 CCCTTTAAAGAGTGCGTAATAGCTCACTGGTGGAGCGTTCTTGCGCCGAAAAT-GTCCGG 1973 Query 506 TATTAAGTTGTCTACCGAAGCAGTGGGAT 534 | ||| || ||||||| ||||||| Sbjct 1974 GACTAAACGACCTGCCGAAGCTGTGGGAT 2002 >seq3198 Length=6291 Score = 131 bits (144), Expect = 6e-28 Identities = 306/452 (68%), Gaps = 21/452 (5%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 ||||||||||| ||||||||| |||| |||| |||| || ||||||| ||||| Sbjct 1487 GACCCGAAACCGAGTGATCTAGTCATGAGCAGGTTGAAAAAACGATAACACGTTTTGGAG 1546 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 | |||||| ||| ||| | || | || ||||| |||| ||||||||||| || | Sbjct 1547 GACCGAACTCACGTCTGTGGCAATAGACGGAGATGACTTGTGATTAGGGGTGAAAAGCCA 1606 Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCA 214 | | |||| ||| |||||||||| ||| ||||| ||||| |||||| || | | | | Sbjct 1607 ATCGAACTCGGAGATAGCTGGTTTTCTGCGAAATCTATTGAGGTAGAGCGTACAACAAAA 1666 Query 215 CCAT--CGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCATTG 272 || |||||||||||||| | || |||| | | | ||||| | || Sbjct 1667 TTATAAAGGGGGTAGAGCACTCGTTGGGTGAGGGTGGCCCAAAGCCTTACTGACCCCAAA 1726 Query 273 CAAACTCCGAATGC--GCATCAG--TTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGT 328 ||||||||||| | || || || ||| || || || | |||||||| Sbjct 1727 GAAACTCCGAATACCTTTATAAGTATTGTAC------AGGCAGACTTTGAGCGCTAAGGT 1780 Query 329 CCGTGCCCGAGAGGAGAAGAATCCGGACTATCA-GCTAAGGCCCCGAAATGACAGCTAAG 387 || ||||||| || | || || | || ||||||| || || | | || || Sbjct 1781 CCAAAGTCGAGAGGGAAACAGCCCAGA-TCGCACGCTAAGGTTCCAAAGCAAGAACTGAG 1839 Query 388 TTAAACTAACGAAGTCTGATT--GCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCAT 445 | | || |||| | ||| || || ||| | |||| || |||||||||||||||| Sbjct 1840 TGGTA--AAGGAAG--TTATTGGGCGAAAACAACCAGGAGGTAGGCTTGGAAGCAGCCA- 1894 Query 446 TCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 || ||| |||| |||||| |||||||| ||| Sbjct 1895 TCCTTTGAAGAAAGCGTAATAGCTCACTGGTC 1926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689538312704