Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq3436 123 5e-26 seq3198 87.8 3e-15 >seq3436 Length=2517 Score = 123 bits (136), Expect = 5e-26 Identities = 176/243 (72%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| || || ||| ||||| ||| ||| | ||| | ||| |||| Sbjct 843 GGTGGATACCTAGGCACCTAGAGACGAAGAAGGGCGTGGTACCGA-CGAAATGCTCCGGG 901 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 ||| | ||||| | | ||||| ||||| |||||| ||| |||| ||| Sbjct 902 GAGCTGG-AAACAAGCGATAATCCGGAGATTCCCGAATAGGGCAACCTC-----TTGA-- 953 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | | | |||||||| |||||| | | || || ||| | | |||||||||||||| ||| Sbjct 954 -ACTACCTGCTGAATTCATAGGCAGGAAAGAGACAACCCAGTGAACTGAAACATCTTAGT 1012 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||||| |||| |||||| ||| | ||||||| ||||| ||||||||||| |||| || Sbjct 1013 AGCTGGAGGAGAAGAAAGCAAAAGCGATTCCCTGAGTAGCGGCGAGCGAAAAGGGACAAG 1072 Query 249 CCT 251 ||| Sbjct 1073 CCT 1075 >seq3198 Length=6291 Score = 87.8 bits (96), Expect = 3e-15 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 ||||||||||||||||||| ||| ||||| ||||||||||||||| ||| |||||||| Sbjct 820 GAACTGAAACATCTAAGTAACTGGAGGAATAGAAATCAACCGAGACTCCGTTAGTAGTGG 879 Query 231 CGAGCGAAATGGGATGAGCCT 251 ||||||| |||| || || Sbjct 880 TGAGCGAATGCGGATTAGGCT 900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918366469216