Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq817 322 2e-85 seq815 113 1e-22 >seq817 Length=3580 Score = 322 bits (356), Expect = 2e-85 Identities = 274/332 (83%), Gaps = 12/332 (4%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 326 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 267 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||| ||||| || ||| ||||| Sbjct 266 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACTATGTCTTCCACCTGGATC 207 Query 127 GGC--CCGCGAAGG--ACCTTAACGCCAGAA-AATGGTCGGTGAAGACCAG-TTCCGCTT 180 ||| | ||| || ||||| || |||| | || ||| || || | ||| | Sbjct 206 GGCGTGCCCGAGGGCCGCCTTAGGGCTAGAAGCAGGGACGG---AGTCCCGCCTCCAACT 150 Query 181 CATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCC 240 || || ||||||||| |||| ||| |||||||||||||||| |||||||| ||||| Sbjct 149 AATGGAATAAGTAAAATAACGTTAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCC 93 Query 241 CACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGG 300 ||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||| Sbjct 92 CACTTATTCTACACCCCTTAAGTCATTTCACAAAGTCGGACTAGAGTCAAACTCAACAGG 33 Query 301 GTCTTCTTTCCCCGCTGATTCCGCCAAGCCCG 332 ||||||||||||||||| || ||||||||| Sbjct 32 GTCTTCTTTCCCCGCTGTTTTTTCCAAGCCCG 1 >seq815 Length=1785 Score = 113 bits (124), Expect = 1e-22 Identities = 67/69 (97%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 472 CTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1785 CTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAA 1726 Query 532 CATCACTTT 540 |||| |||| Sbjct 1725 CATC-CTTT 1718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635140298848