Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq3198 154 5e-35 >seq3198 Length=6291 Score = 154 bits (170), Expect = 5e-35 Identities = 179/238 (75%), Gaps = 5/238 (2%) Strand=Plus/Minus Query 331 GCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTT 390 ||||||| || | | ||||||||| | | | || | |||||||| ||| |||||| Sbjct 2879 GCATCTTCACGGAGAATTCAATTTCACTGAGACCATGTTGGAGACAGCGGGGAAGTCGTG 2820 Query 391 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 450 || |||||| |||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 2819 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 2760 Query 451 TAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGC-CTCACACACC---AC-GTGG 505 |||||| ||||||||||||||| ||| ||| || || | || || | Sbjct 2759 GAGTTACGGCCGCCGTTTACTGGGCCTTGCATTCAAAGCTTTCTCTTTCCTAAACAGAAA 2700 Query 506 TGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTC 563 | | ||| |||| |||| ||||||||||||||||| ||||| || ||||| || Sbjct 2699 AGAGAGCACCTCTCCTGTTAAGTTTCCAGCACCGGGCAGGTGTCAGACCCTATACATC 2642 Score = 89.7 bits (98), Expect = 2e-15 Identities = 107/144 (74%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 3 GACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAA 62 |||||||||||||| |||||| || ||| | | |||| ||| || |||||| || Sbjct 3273 GACTTGTAAGTCTCACAGTCAGGCAAGCTTTTACCATTACGCTCTACAGCTGATTTCCGT 3214 Query 63 CCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTT 122 |||| |||| ||||| | | | |||||||| ||| ||| || ||||||||||| Sbjct 3213 CCAGCTTGAGCTTACCTTCGCACACTTCCGTTACTCTTTAGGA-AGCGACCGCCCCAGTC 3155 Query 123 AAACTACCCACCAGGCACTGTCCC 146 |||||||||| | ||||||||| Sbjct 3154 AAACTACCCATCTATCACTGTCCC 3131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702337845376