Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq816 641 0.0 >seq816 Length=4168 Score = 641 bits (710), Expect = 0.0 Identities = 452/509 (89%), Gaps = 8/509 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| ||||| ||| |||| |||| |||||||||||||||||| Sbjct 1820 GTACTCATTCCAATTACCAGACCTGAAAAGGCCCGGTATTGTTATTTATTGTCACTACCT 1761 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1760 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1701 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||| | |||| ||||||| ||||||||| Sbjct 1700 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATCCTCCGTCACCCGTTACCACCATGGTA 1641 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1640 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAAACATCGCCGGCG 1581 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC---GTT 297 |||||||||||||||||| ||||||| |||| ||||| ||| || | || || || Sbjct 1580 CAAGGCCATGCGATTCGTGAAGTTATCATGATTCACC-GCGAGACCGGCAGAGCCGGGTC 1522 Query 298 GGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCT 356 || || ||||||||||||| ||||||| |||||| ||| ||| ||| ||||||||| Sbjct 1521 GGCCTTAAATCTAATAAATACGTCCCTTCCAGAAGTC-GGGATTTACGCACGTATTAGCT 1463 Query 357 CTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTA 416 |||||||||| |||||||||| |||||||||||| ||||||||||| |||||||||||| Sbjct 1462 CTAGAATTACTACGGTTATCC-GGTAGTAAGGTACCATCAAATAAACTATAACTGATTTA 1404 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTAAT 475 ||||||||||||||||||||| ||||| | | |||||||||||||||||||||||||| Sbjct 1403 ATGAGCCATTCGCAGTTTCACAGTATAAAGCAGTTTATACTTAGACATGCATGGCTTAAT 1344 Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||| Sbjct 1343 CTTTGAGACAAGCATATGACTACTGGCAG 1315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510344855296