Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parachlorella_20kessleri_20[genbank_20GCA_5F001598975.1_202015-12- 19] 3,651 sequences; 59,187,803 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1200 100 2e-16 seq2126 84.2 2e-11 >seq1200 Length=20974 Score = 100 bits (110), Expect = 2e-16 Identities = 127/170 (75%), Gaps = 6/170 (4%) Strand=Plus/Plus Query 61300 TTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATC 61359 ||||||||||||||||||||||| ||||| ||||||| ||||||||| | || | Sbjct 4471 TTCTACGGCTTCCAGATTGCCATTGAGAACATCCACTCCGAGATGTACTCCCTGCTGCTG 4530 Query 61360 GATACGTACATCAGGGA-GCGGGCG-GAACGTGAA-CGATTGTTCAATGCCATCGAGACG 61416 || ||||||||| ||| | | || ||| ||| || | ||| | |||| ||||||| Sbjct 4531 GAGTCGTACATCAAGGACTCTGCCGAGAA---GAACCGCCTCTTCCACGCCACCGAGACG 4587 Query 61417 ATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAG 61466 | || | || ||| ||| ||||| ||||| |||| ||||||||||| Sbjct 4588 GTGCCAGTCGTCAAGAAGAAGGCGGACTGGGCGCTCAAGTGGATCACCAG 4637 >seq2126 Length=41412 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493 |||||| || || || || || || || ||||||||||| ||| ||| |||||| | || Sbjct 20983 GAACTCCCCAGAGAGCACCCGGCGCACGTAGATGTTGGAGGTGTAGGGCTCAAAGCACTC 20924 Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553 ||||||| || || ||| || || || || |||||||| || |||| || ||||| Sbjct 20923 GTTGTTGCCCAGGATCTGGCTGGTGGAGGCGGTGGGCATGGGGGCCACCAGCAGCGAGTT 20864 Query 65554 TCGCAATCCGT 65564 |||| |||| Sbjct 20863 GCGCACGCCGT 20853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397550309590640