Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq197 266 6e-69 >seq197 Length=5048 Score = 266 bits (294), Expect = 6e-69 Identities = 208/245 (85%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 ||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 1279 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCACCGCTCTGAATACATTAGCATGGA 1338 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | ||||||| | | |||| |||||||| | |||||||| ||||||||||| Sbjct 1339 ATAACACGATAGGACT--CTGGCCTATCTTGTTGGTCTGTAGGACCGGAGTAATGATTAA 1396 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 ||||| ||||||||| | ||||| ||||||||||||||||||||||||||||| | Sbjct 1397 GAGGGACAGTCGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTATGAA 1456 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||||||||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 1457 AGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 1515 Query 314 AGGGG 318 |||| Sbjct 1516 GGGGG 1520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915191946240