Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq880 96.9 4e-18 >seq880 Length=74269 Score = 96.9 bits (106), Expect = 4e-18 Identities = 126/170 (74%), Gaps = 6/170 (4%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-T 80 || |||| |||||| || | || || |||||||||| || ||| || | | | | Sbjct 70855 CGTAAACCGACACAGGTGGGTTAGTAGAGTATACTAAGGGGCGCGAGATAA-CTCTCTCT 70797 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGG 140 |||||||| |||||| |||||| |||||||||||| || |||| || | | ||| | Sbjct 70796 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCCTCTCTAAAA---G 70740 Query 141 AGGG-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 |||| ||||| || ||| || ||| |||||||| |||||||| ||| || Sbjct 70739 AGGGCCGCAGTGACCAGGCCCTGGCGACTGTTTATCAAAAACATAGGTCT 70690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531195471520