Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq880 87.8 2e-15 seq879 82.4 7e-14 >seq880 Length=74269 Score = 87.8 bits (96), Expect = 2e-15 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||||| |||||||||||| ||||||| || ||| ||||| || ||| || | Sbjct 70727 ACCAGGCCCTGGCGACTGTTTATCAAAAACATAGGTCTCCGCAAAGTCGTAAGACAACAT 70668 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || ||| |||||||||||| ||||||||||||||| Sbjct 70667 ATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 70632 >seq879 Length=37587 Score = 82.4 bits (90), Expect = 7e-14 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || |||||||||||| ||| Sbjct 16946 GCGACTGTTTACTAAAAACACAGGACTCTGCCAAGTGGTAACACGACGTATAGGGTCTGA 17005 Query 128 CGCCTGCCCGGTGCCGGA 145 | |||||||||||| ||| Sbjct 17006 CACCTGCCCGGTGCTGGA 17023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476795935280