Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq880 365 1e-98 seq879 138 2e-30 >seq880 Length=74269 Score = 365 bits (404), Expect = 1e-98 Identities = 293/350 (84%), Gaps = 4/350 (1%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | |||||||||||| |||||| Sbjct 70448 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCTGATCGTT 70507 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 70508 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 70567 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATT--GCTCTAACAGAT 184 ||||||||||||||||| || ||||||| || ||||||| | |||||| | Sbjct 70568 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGTAAGCTTCGAATAAATTCTAACCTAC 70627 Query 185 CCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGC 244 |||||||||||| |||| |||||||||||||| || ||| | ||||| |||||| || Sbjct 70628 TTCCTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATATGTTGTCTTACGACTTTGC 70687 Query 245 AGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGG-CCTGTCATAGA 303 || |||| |||||||| ||||||||||| |||||| || |||||| ||| | |||| Sbjct 70688 GGAGACCTATGTTTTTGATAAACAGTCGCCAGGGCCTGGTCACTGCGGCCCTCTTTTAGA 70747 Query 304 CA-GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 70748 GAGGGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 70797 >seq879 Length=37587 Score = 138 bits (152), Expect = 2e-30 Identities = 185/256 (72%), Gaps = 20/256 (8%) Strand=Plus/Minus Query 108 CGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTT 167 || |||||||||||||| | |||||||||||||||||||||| || ||| Sbjct 17102 CGATACCTTAGGACCGTCAGAGTTACGGCCGCCGTTTACTGG-----------AC--CTT 17056 Query 168 CGATT----GCTCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTA 223 ||||| || ||| ||| || |||||||||||||||| ||||| |||| Sbjct 17055 CGATTTCAAGCGTGAACCTGTCCTGTTCGGTATCCAGCACCGGGCAGGTGTCAGACCCTA 16996 Query 224 TACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTAT 283 ||| |||| || | |||| ||||| ||||||||||| ||||||||||||| ||||| Sbjct 16995 TACGTCGTGTTACCACTTGGCAGAGTCCTGTGTTTTTAGTAAACAGTCGCTACCCCCTAT 16936 Query 284 TCTCTGCGGCCTGTCATAGACA-GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCC 342 || ||| || |||| || || | || | | || ||| ||||| | || |||||| Sbjct 16935 ACTGTGCCACCATGCATATGCATGGTCCTCCATATTCCAAAGGTACGGAGGCAATTTGCC 16876 Query 343 GAGTTCCTTAACAATA 358 ||||||||| ||||| Sbjct 16875 GAGTTCCTT--CAATA 16862 Score = 91.5 bits (100), Expect = 3e-16 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||| ||| | || | ||||||||| |||| ||| | ||||||| | | |||| Sbjct 17923 GCATCTGCACGGAGAATTCAATTTCACTGAGTGTATATTGGAGACAGCGGGGCAGTCGTG 17864 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCT 111 || || ||| ||| |||||||||||||||||||||||||||||| Sbjct 17863 ACACCATTCATGCACGTCGGAACTTACCCGACAAGGAATTTCGCT 17819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062390650880