Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq880 107 2e-21 seq879 82.4 8e-14 >seq880 Length=74269 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| | || ||| || |||||||||| || | | ||||||| ||| Sbjct 70419 GGGTCTTTCTGTCCAAGTGCAAGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 70478 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 || | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 70479 -TCTCTCTCCGAGACAGTGCCCTGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 70537 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 70538 ACAAGGAATTTCGCTACCTTAGGACCGTTA 70567 >seq879 Length=37587 Score = 82.4 bits (90), Expect = 8e-14 Identities = 84/114 (74%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 45 GGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNN 104 ||| | || |||||| ||| || | | ||||||||||||| | | ||||||| Sbjct 17932 GGGGACTCCGCATCTGCACGGAGAATTCAATTTCACTGAGTGTATATTGGAGACAGCGGG 17873 Query 105 NNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCT 158 ||||||||| |||| |||||||||||||||||||||||||||||| Sbjct 17872 GCAGTCGTGACACCATTCATGCACGTCGGAACTTACCCGACAAGGAATTTCGCT 17819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547195335120