Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq880 104 2e-20 seq879 89.7 4e-16 >seq880 Length=74269 Score = 104 bits (114), Expect = 2e-20 Identities = 119/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||| ||| |||||||||| |||| || ||| || | |||||| | |||||| Sbjct 73107 CGAGTTTCAGCCTACAATCCGAACTAAGACCGGGTTTTTGAGGTTAGCTTGCTCTCGCGA 73166 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | || | || ||| |||||||| ||||||| ||||| | |||||| ||| Sbjct 73167 GATTGCATCTCTTTGTCCCGGCCATTGTAGCACGTGTGTAGCCCAGGGCGTAAGGGGCAT 73226 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | ||||||||||||||| ||||||||||||| || |||| Sbjct 73227 GCTGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 73266 >seq879 Length=37587 Score = 89.7 bits (98), Expect = 4e-16 Identities = 117/161 (73%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||||||| ||||||| ||| | | ||| | |||| ||||| ||| || Sbjct 23585 TCGAGTTGCAGACACCAATCCGTACTGAGGTGTGATTTG-GCGATTGGCTCCACCTTTCG 23643 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || | ||| ||||||||| ||||||| ||||| |||||||| || Sbjct 23644 GTCTTGCTACGTATTGTTCACACCATTGTAACACGTGTGTAGCCCAGTTCATAAGGGTCA 23703 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 |||||||||||||||||||| ||| ||||| || | |||| Sbjct 23704 TGAGGACTTGACGTCATCCCATCCTGCCTCCAGTCTCTCAC 23744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415996453600