Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq880 208 1e-51 seq879 84.2 4e-14 >seq880 Length=74269 Score = 208 bits (230), Expect = 1e-51 Identities = 220/290 (76%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||| |||||||| ||||| ||||||||| | |||||| ||||||||| |||||| Sbjct 73643 CCCTCGCTTTCGTCTCTCAGTGTCAGTTACGGCCCAGCAGAGTGCCTTCGCCTTTGGTGT 73702 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| || |||||||||||||||||| ||| |||||||| |||| || | | || Sbjct 73703 TCCTCCCGATCTCTACGCATTTCACCGCTCCACCGGGAATTCCCTCTGCCCCTACCGAAC 73762 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 ||||| | |||||| ||| || ||||| |||| | ||| ||| |||| Sbjct 73763 TCAAGTTTATTAGTTTCTTCTGCCTGCCCAGGGTTAGGCCCTGATCTTTGACAAAAGACT 73822 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 || || |||||| | |||||| |||||| |||||||||||||||||| ||| | Sbjct 73823 TGATAAACCACCTACAGACGCTTTACGCCCAATTAATCCGGATAACGCTTGCATCCTCTG 73882 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 | ||||||||||||||||||| ||||||||| ||||||||||||| || Sbjct 73883 TCTTACCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATA 73932 >seq879 Length=37587 Score = 84.2 bits (92), Expect = 4e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || ||||| || |||||| |||||| | | | |||||||||||| | ||||||||| Sbjct 24281 CCACCTACGTGCGCTTTACGCCCAATCATTTTGAATAACGCTTGCCCCTCTCGTATTACC 24340 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||||||||||||||| | ||||||| | ||| Sbjct 24341 GCGGCTGCTGGCACGAAATTAGCCGGGACTT 24371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828792934480