Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq880 223 8e-56 seq879 163 7e-38 >seq880 Length=74269 Score = 223 bits (246), Expect = 8e-56 Identities = 164/191 (86%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| ||||| || || | ||||||| || ||| | |||||||| |||||||| Sbjct 73962 TTTACAACCCATAGGCCGTCATCCTTCACGCGGTATTGCTCCGTCAGGCTTTCGCCCATT 74021 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||||| |||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 74022 GCGGAAAATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 74081 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||||||||||| |||||| ||||||||||| ||| ||||||||| ||| Sbjct 74082 GGCTGATCATCCTCTCAGAACAGCTACTGATCGTCGCCTTGGTAAGCCATTACCTTACCA 74141 Query 185 ACTAGCTAATC 195 ||||||||||| Sbjct 74142 ACTAGCTAATC 74152 >seq879 Length=37587 Score = 163 bits (180), Expect = 7e-38 Identities = 129/155 (83%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 43 CTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTG 102 ||| |||||||||||||||||||| ||| |||||||||||||||| | |||| | ||||| Sbjct 24452 CTGGATCAGGCTTGCGCCCATTGTCCAAGATTCCCCACTGCTGCCGCTCGTAAGCGTCTG 24511 Query 103 GACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCC 162 | |||||||||||| |||||||||| | |||| |||||| ||| |||||| ||| | | Sbjct 24512 GGCCGTGTCTCAGTCCCAGTGTGGCCGATCATTCTCTCAAACCGGCTAGGCATCTCAGGC 24571 Query 163 TAGGTGGGCCATTACCCCGCCAACTAGCTAATCCC 197 | |||| ||||||||| | ||||| | ||||| || Sbjct 24572 TTGGTGCGCCATTACCACACCAACAACCTAATACC 24606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222389242880