Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq450 666 0.0 >seq450 Length=1408 Score = 666 bits (738), Expect = 0.0 Identities = 471/534 (88%), Gaps = 10/534 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| |||||||| |||||| |||| | ||||||||||||||||||| Sbjct 752 CTTTTGTTCCACACGAGATTTCCGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 811 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||| ||||| || ||| ||||| Sbjct 812 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACTATGTCTTCCACCTGGATC 871 Query 127 GGCCCGC--GAAGGAC--CTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTTC 181 ||| || | ||| | ||| ||| |||| || | || | || | ||| || Sbjct 872 GGCGTGCCCGGAGGCCGCCTTGGCGCGAGAAGCAGG--GACGACGTCCCGCCTCCAACTC 929 Query 182 ATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCC 241 || || ||||||||| ||| ||| |||||||||||||||| |||||| | |||||| Sbjct 930 ATGGAATAAGTAAAATGACGTTAAAAGTAGTGGTATTTCACTGGCGCCGGA---GCTCCC 986 Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 987 ACTTATTCTACACCTTCTAAGTCATTTCACAAAGTCGGACTAGAGTCAAACTCAACAGGG 1046 Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 |||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 1047 TCTTCTTTCCCCGCTGTTTTTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 1106 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1107 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 1166 Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1167 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 1226 Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1227 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACATC 1280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635185610240