Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq880 179 8e-43 seq879 113 1e-22 >seq880 Length=74269 Score = 179 bits (198), Expect = 8e-43 Identities = 216/295 (73%), Gaps = 19/295 (6%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | || ||| ||| Sbjct 73892 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAA------------ 73939 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 || || ||| || | ||||||||||||||| || ||| || ||||||||||||| Sbjct 73940 --AA----TTCTTCTCTGAGAAAAGAAGTTTACAACCCATAGG-CCGTCATCCTTCACGC 73992 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | ||| |||| || ||| |||||| || |||||||||||||||||||||||| Sbjct 73993 GGTATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCTCACTGCTGCCTCCCGTAG 74052 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | |||||||||||| ||| || Sbjct 74053 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGAACAGCTACTGAT 74112 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 ||| | || ||| ||| ||||| || |||| ||||| ||||| ||| || Sbjct 74113 CGTCGCCTTGGTAAGCCATTACCTTACCAACTAGCTAATCAGACGCAAGCCCGTC 74167 >seq879 Length=37587 Score = 113 bits (124), Expect = 1e-22 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 128 CTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTG 187 |||| |||| || || |||||| |||| ||||| |||||||||| | |||| | || || Sbjct 24452 CTGGATCAGGCTTGCGCCCATTGTCCAAGATTCCCCACTGCTGCCGCTCGTAAGCGTCTG 24511 Query 188 GACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGC 247 | |||||||||||| ||| ||||| || | | |||||| | | ||| |||| |||| Sbjct 24512 GGCCGTGTCTCAGTCCCAGTGTGGCCGATCATTCTCTCAAACCGGCTAGGCATCTCAGGC 24571 Query 248 TAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | |||| ||| ||||| | || || ||||||| Sbjct 24572 TTGGTGCGCCATTACCACACCAACAACCTAAT 24603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068790594560