Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picochlorum_20sp._20SENEW3_20[genbank_20GCA_5F000876415.1_202014-07- 28] 880 sequences; 13,390,658 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq197 618 1e-174 >seq197 Length=5048 Score = 618 bits (684), Expect = 1e-174 Identities = 447/508 (88%), Gaps = 9/508 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| ||||| |||| |||| |||| |||||||||||||||||| Sbjct 1051 GTACTCATTCCAATTACCAGACC--AAAG-GCCCGGTATTGTTATTTATTGTCACTACCT 995 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 994 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 935 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||| Sbjct 934 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCACCATGGTA 875 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 874 GGCCTCTATCCTACCATCAAAAGTTGATAGGGCAGAAATTTGAATGAAACATCGCCGGCG 815 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC--GTTG 298 | |||||||||||||||| ||||||| |||| ||||| ||| | | | | | || | Sbjct 814 CGAGGCCATGCGATTCGTGAAGTTATCATGAGTCACC-GCGAGTCGGGCAAGCCCGGTCG 756 Query 299 GTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTC 357 | ||||||||||||||||| ||||||| |||||| ||| | | ||| |||||||||| Sbjct 755 GCCTTTTATCTAATAAATACGTCCCTTCCAGAAGTC-GGGATGTACGCACGTATTAGCTC 697 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 ||||||||| |||| ||||| ||| |||||| ||||||||||| ||||||||||||| Sbjct 696 TAGAATTACTACGGGTATCCGAGTAAGTAGGTACCATCAAATAAACTATAACTGATTTAA 637 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTAATC 476 |||||||||||||||||||| ||||| | | ||||||||||||||||||||||||||| Sbjct 636 TGAGCCATTCGCAGTTTCACAGTATAAAGCAGTTTATACTTAGACATGCATGGCTTAATC 577 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 576 TTTGAGACAAGCATATGACTACTGGCAG 549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510386708480