Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1023 143 1e-32 seq1010 125 4e-27 >seq1023 Length=7928 Score = 143 bits (158), Expect = 1e-32 Identities = 104/118 (88%), Gaps = 3/118 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA-AAATGATAACATCGCC 59 |||||||||||||||||||||||| |||||||||| | ||||| |||| |||| | | | Sbjct 4508 GAACCCAAAGACTTTGATTTCTCGGAAGGTGCCGATCCAGTCAGAAAT--TAACGTGGAC 4451 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||| ||||||||||| ||||||||| ||||| || || Sbjct 4450 CGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTAATCGTTTTTGA 4393 >seq1010 Length=4219 Score = 125 bits (138), Expect = 4e-27 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGA-GTCAAAATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||| | |||| |||| | | ||||| | Sbjct 675 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTG-GCGAAGTCATTAAAAAAACATTCGC 617 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||| Sbjct 616 CAATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278396429520