Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1023 369 7e-100 seq1010 259 9e-67 >seq1023 Length=7928 Score = 369 bits (408), Expect = 7e-100 Identities = 271/313 (87%), Gaps = 2/313 (1%) Strand=Plus/Plus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGAT-CCGCATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| ||||||| ||| ||| ||| || ||| |||||||||| ||||||||| | ||| Sbjct 4080 GTCTGGCCGGGTCTTACCTCTTGGTGAGGCCGTATGCCCTTCATTGGGTGTGCGGTGGAA 4139 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 |||||| |||||| |||| |||||||||||||||||||||||| |||| |||||||||| Sbjct 4140 CCAGGAATTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCAATTGCCCGAATACATT 4199 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 4200 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTA 4259 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||| | |||||||| | ||||||| ||| ||||||||||||||| || Sbjct 4260 ATGATTAATAGGAACGGTCGGGGGCATTAGTATTCCGTTGCTAGAGGTGAAATTCTTAGA 4319 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 |||| |||||||||| ||||||||||| || ||||||| ||||||||| |||| ||| Sbjct 4320 TTTACGGAAGACTAACAACTGCGAAAGCATTTGCCAAGGACGTTTTCATTGATCA-AGAA 4378 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 4379 CGAAGGTTAGGGG 4391 >seq1010 Length=4219 Score = 259 bits (286), Expect = 9e-67 Identities = 205/244 (84%), Gaps = 3/244 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 ||||||||| ||||||||||||||||||||||| | || |||||| ||||||||||| Sbjct 317 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCTTACGCCAGAATACTTTAGCATGGAA 376 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||| | ||||||| | | |||| |||||||| | |||||||| ||||||||||| Sbjct 377 TAACACGATAGGACT--CTGGCCTATCTTGTTGGTCTGTAGGACCGGAGTAATGATTAAG 434 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 ||||| ||||||||| | ||||| ||||||||||||||||||||||||||||| || Sbjct 435 AGGGACAGTCGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTATGAAA 494 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||| ||||||||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 495 GACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTG 553 Query 315 GGGG 318 |||| Sbjct 554 GGGG 557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915187480064