Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq1022 205 2e-50 seq21 205 2e-50 >seq1022 Length=134933 Score = 205 bits (226), Expect = 2e-50 Identities = 291/407 (71%), Gaps = 8/407 (2%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| | | ||||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct 130977 TACTTAAGGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGC 131036 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 ||||||| |||||| | |||||||||||| | | ||| |||| ||| || ||| Sbjct 131037 AAGCGTTGTCCGGAATGATTGGGCGTAAAGCATCTGTAGGTGGTTTCTAAAGTCAACTGT 131096 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTG-ACTGCACGACTAGAGTGTGTCAG 181 ||||||| | ||| ||| | || ||| ||| | ||| |||| |||| | || Sbjct 131097 TAAATCCCAGAGCTCAACTTTGGCCAAGCAGTTGAGTACTTAGAGACTTGAGTACGGTAG 131156 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 || | |||||||| || |||| ||||||||| |||| || ||| |||||||| || Sbjct 131157 GGGTAGAGGGAATTCCTTGTTTAGCGGTGAAATGCATAGAGATAAGGAAGAACACCAGTG 131216 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 ||||| || | ||||| |||||| || | | ||||| ||||||| || | Sbjct 131217 GCGAAAGCGCTCTACTGGGCCGTAACTGACACTGAGAGATGAAAGTTAGGGGAGCGAAAA 131276 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTAC 361 |||||||||||||| ||||||| | |||||||| |||| || || | | Sbjct 131277 GGATTAGATACCCTTGTAGTCCTAACTGTAAACGATGGATACTAAGTGCTG----TCAAA 131332 Query 362 TTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATA 408 | || | ||||||||||||| |||| ||||||||||| || Sbjct 131333 AACAGTGCT---GTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 131376 >seq21 Length=95773 Score = 205 bits (226), Expect = 2e-50 Identities = 291/407 (71%), Gaps = 8/407 (2%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| | | ||||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct 8000 TACTTAAGGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGC 7941 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 ||||||| |||||| | |||||||||||| | | ||| |||| ||| || ||| Sbjct 7940 AAGCGTTGTCCGGAATGATTGGGCGTAAAGCATCTGTAGGTGGTTTCTAAAGTCAACTGT 7881 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTG-ACTGCACGACTAGAGTGTGTCAG 181 ||||||| | ||| ||| | || ||| ||| | ||| |||| |||| | || Sbjct 7880 TAAATCCCAGAGCTCAACTTTGGCCAAGCAGTTGAGTACTTAGAGACTTGAGTACGGTAG 7821 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 || | |||||||| || |||| ||||||||| |||| || ||| |||||||| || Sbjct 7820 GGGTAGAGGGAATTCCTTGTTTAGCGGTGAAATGCATAGAGATAAGGAAGAACACCAGTG 7761 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 ||||| || | ||||| |||||| || | | ||||| ||||||| || | Sbjct 7760 GCGAAAGCGCTCTACTGGGCCGTAACTGACACTGAGAGATGAAAGTTAGGGGAGCGAAAA 7701 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTAC 361 |||||||||||||| ||||||| | |||||||| |||| || || | | Sbjct 7700 GGATTAGATACCCTTGTAGTCCTAACTGTAAACGATGGATACTAAGTGCTG----TCAAA 7645 Query 362 TTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATA 408 | || | ||||||||||||| |||| ||||||||||| || Sbjct 7644 AACAGTGCT---GTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 7601 Score = 205 bits (226), Expect = 2e-50 Identities = 291/407 (71%), Gaps = 8/407 (2%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| | | ||||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct 87853 TACTTAAGGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGC 87912 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 ||||||| |||||| | |||||||||||| | | ||| |||| ||| || ||| Sbjct 87913 AAGCGTTGTCCGGAATGATTGGGCGTAAAGCATCTGTAGGTGGTTTCTAAAGTCAACTGT 87972 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTG-ACTGCACGACTAGAGTGTGTCAG 181 ||||||| | ||| ||| | || ||| ||| | ||| |||| |||| | || Sbjct 87973 TAAATCCCAGAGCTCAACTTTGGCCAAGCAGTTGAGTACTTAGAGACTTGAGTACGGTAG 88032 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 || | |||||||| || |||| ||||||||| |||| || ||| |||||||| || Sbjct 88033 GGGTAGAGGGAATTCCTTGTTTAGCGGTGAAATGCATAGAGATAAGGAAGAACACCAGTG 88092 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 ||||| || | ||||| |||||| || | | ||||| ||||||| || | Sbjct 88093 GCGAAAGCGCTCTACTGGGCCGTAACTGACACTGAGAGATGAAAGTTAGGGGAGCGAAAA 88152 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTAC 361 |||||||||||||| ||||||| | |||||||| |||| || || | | Sbjct 88153 GGATTAGATACCCTTGTAGTCCTAACTGTAAACGATGGATACTAAGTGCTG----TCAAA 88208 Query 362 TTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATA 408 | || | ||||||||||||| |||| ||||||||||| || Sbjct 88209 AACAGTGCT---GTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 88252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289582358272