Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq21 102 9e-20 seq1022 98.7 1e-18 >seq21 Length=95773 Score = 102 bits (112), Expect = 9e-20 Identities = 127/168 (76%), Gaps = 6/168 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || |||| |||| || ||| ||| | | | |||| Sbjct 4251 AAACCGACACAGGTAGGTTGGTAGAGAATACCAAGGGGCGCGAGAGAA-CTCTCTCTAAG 4193 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT-CCCTACCCAGAAATGGGAG 142 ||||| |||||||| ||| |||||||||| | || ||| |||| | ||| ||||| Sbjct 4192 GAACTCGGCAAACTAGCCCCGTAACTTCGGAAGAAGGGGCGCCCT--CTTTAAACGGGAG 4135 Query 143 GG-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 || ||||| || |||| | |||||||||||| |||||||||||| || Sbjct 4134 GGTCGCAGTGACGAGGTTCTGGCAACTGTTTATCAAAAACACAGGTCT 4087 Score = 98.7 bits (108), Expect = 1e-18 Identities = 125/167 (75%), Gaps = 5/167 (3%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || |||| |||| || ||| ||| | | | |||| Sbjct 91602 AAACCGACACAGGTAGGTTGGTAGAGAATACCAAGGGGCGCGAGAGAA-CTCTCTCTAAG 91660 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| |||||||| ||| |||||||||| | || ||| || | | || |||||| Sbjct 91661 GAACTCGGCAAACTAGCCCCGTAACTTCGGAAGAAGGGGCGCC--CTCTTTAACGGGAGG 91718 Query 144 G-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||||| || |||| | |||||||||||| |||||||||||| || Sbjct 91719 GTCGCAGTGACGAGGTTCTGGCAACTGTTTATCAAAAACACAGGTCT 91765 >seq1022 Length=134933 Score = 98.7 bits (108), Expect = 1e-18 Identities = 125/167 (75%), Gaps = 5/167 (3%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || |||| |||| || ||| ||| | | | |||| Sbjct 134726 AAACCGACACAGGTAGGTTGGTAGAGAATACCAAGGGGCGCGAGAGAA-CTCTCTCTAAG 134784 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| |||||||| ||| |||||||||| | || ||| || | | || |||||| Sbjct 134785 GAACTCGGCAAACTAGCCCCGTAACTTCGGAAGAAGGGGCGCC--CTCTTTAACGGGAGG 134842 Query 144 G-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||||| || |||| | |||||||||||| |||||||||||| || Sbjct 134843 GTCGCAGTGACGAGGTTCTGGCAACTGTTTATCAAAAACACAGGTCT 134889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531192960272