Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq320 73.4 4e-11 seq21 73.4 4e-11 >seq320 Length=88325 Score = 73.4 bits (80), Expect = 4e-11 Identities = 67/85 (79%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 || ||||||||| |||||||||| ||| ||||| || ||| | ||| ||| ||| Sbjct 3375 GCAACTGTTTATCAAAAACACAGGTCTCCGCAAAGTCGTAAGACAATATATGGGGGCTGA 3434 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||| |||||||||||| || Sbjct 3435 CGCCTGCCCAGTGCCGGAAGGTCAA 3459 >seq21 Length=95773 Score = 73.4 bits (80), Expect = 4e-11 Identities = 67/85 (79%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 || ||||||||| |||||||||| ||| ||||| || ||| | ||| ||| ||| Sbjct 4113 GCAACTGTTTATCAAAAACACAGGTCTCCGCAAAGTCGTAAGACAATATATGGGGGCTGA 4054 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||| |||||||||||| || Sbjct 4053 CGCCTGCCCAGTGCCGGAAGGTCAA 4029 Score = 73.4 bits (80), Expect = 4e-11 Identities = 67/85 (79%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 || ||||||||| |||||||||| ||| ||||| || ||| | ||| ||| ||| Sbjct 91739 GCAACTGTTTATCAAAAACACAGGTCTCCGCAAAGTCGTAAGACAATATATGGGGGCTGA 91798 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||| |||||||||||| || Sbjct 91799 CGCCTGCCCAGTGCCGGAAGGTCAA 91823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476793681208