Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1023 468 9e-130 seq246 399 4e-109 >seq1023 Length=7928 Score = 468 bits (518), Expect = 9e-130 Identities = 262/264 (99%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 810 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 751 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 750 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 691 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 690 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 631 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 630 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTCCGAGGGACTAAAGGATCGATAGGC 571 Query 272 CACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||| Sbjct 570 CACACTTTCATGGTTTGTATTCAC 547 >seq246 Length=36864 Score = 399 bits (442), Expect = 4e-109 Identities = 268/295 (91%), Gaps = 3/295 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGA-CGGTC-ATCAGTAGGGTAAAACTAACCTGTCT 58 |||| ||| ||||||| || || | || ||||| | |||||||||||||||||||||||| Sbjct 33574 TACTGAGCCGAATTACTAT-GGCGAGATCGGTCCAACAGTAGGGTAAAACTAACCTGTCT 33516 Query 59 CATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 33515 CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGT 33456 Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 33455 GAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 33396 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 33395 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGC 33336 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| | ||||||||||||||||||| |||||| |||||||||| Sbjct 33335 TTCAAATCCCGAAAGGCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 33281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854388311808